PDB entry 5nbk
View 5nbk on RCSB PDB site
Description: NDM-1 metallo-beta-lactamase: a parsimonious interpretation of the diffraction data
Class: hydrolase
Keywords: HYDROLASE, NDM-1, metallo-beta-lactamase
Deposited on
2017-03-02, released
2018-10-03
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-10-16, with a file datestamp of
2019-10-11.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.2
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Metallo-beta-lactamase type 2
Species: Klebsiella pneumoniae [TaxId:573]
Gene: blaNDM-1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5nbka1, d5nbka2 - Chain 'C':
Compound: Metallo-beta-lactamase type 2
Species: Klebsiella pneumoniae [TaxId:573]
Gene: blaNDM-1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5nbkc1, d5nbkc2 - Heterogens: ZN, PG4, CL, P6G, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5nbkA (A:)
mgeirptigqqmetgdqrfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrvl
vvdtawtddqtaqilnwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnq
lapqegmvaaqhsltfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafgg
clikdskakslgnlgdadtehyaasarafgaafpkasmivmshsapdsraaithtarmad
klrlehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>5nbkA (A:)
rptigqqmetgdqrfgdlvfrqlapnvwqhtsyldgavasnglivrdggrvlvvdtawtd
dqtaqilnwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnqlapqegmv
aaqhsltfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafggclikdska
kslgnlgdadtehyaasarafgaafpkasmivmshsapdsraaithtarmadklrle
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5nbkC (C:)
mgeirptigqqmetgdqrfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrvl
vvdtawtddqtaqilnwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnq
lapqegmvaaqhsltfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafgg
clikdskakslgnlgdadtehyaasarafgaafpkasmivmshsapdsraaithtarmad
klrlehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>5nbkC (C:)
dqrfgdlvfrqlapnvwqhtsyldgavasnglivrdggrvlvvdtawtddqtaqilnwik
qeinlpvalavvthahqdkmggmdalhaagiatyanalsnqlapqegmvaaqhsltfaan
gwvepatapnfgplkvfypgpghtsdnitvgidgtdiafggclikdskakslgnlgdadt
ehyaasarafgaafpkasmivmshsapdsraaithtarmadklrle