PDB entry 5n6s

View 5n6s on RCSB PDB site
Description: Thermotoga maritima family 1 Glycoside hydrolase complexed with Carba-Cyclophellitol transition state mimic
Class: hydrolase
Keywords: hydrolase, carba-cyclophellitol, mimic
Deposited on 2017-02-16, released 2017-03-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-05-24, with a file datestamp of 2017-05-19.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: beta-glucosidase a
    Species: Thermotoga maritima [TaxId:2336]
    Gene: BGLA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5n6sa_
  • Chain 'B':
    Compound: beta-glucosidase a
    Species: Thermotoga maritima [TaxId:2336]
    Gene: BGLA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5n6sb_
  • Chain 'C':
    Compound: beta-glucosidase a
    Species: Thermotoga maritima [TaxId:2336]
    Gene: BGLA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5n6sc_
  • Chain 'D':
    Compound: beta-glucosidase a
    Species: Thermotoga maritima [TaxId:2336]
    Gene: BGLA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5n6sd_
  • Heterogens: EDO, CL, IMD, 8P5, PEG, ACT, PGE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5n6sA (A:)
mgsshhhhhhssglvprgshmasnvkkfpegflwgvatasyqiegspladgagmsiwhtf
shtpgnvkngdtgdvacdhynrwkedieiieklgvkayrfsiswprilpegtgrvnqkgl
dfynriidtllekgitpfvtiyhwdlpfalqlkggwanreiadwfaeysrvlfenfgdrv
knwitlnepwvvaivghlygvhapgmrdiyvafravhnllraharavkvfretvkdgkig
ivfnngyfepasekeediravrfmhqfnnyplflnpiyrgdypelvlefareylpenykd
dmseiqekidfvglnyysghlvkfdpdapakvsfverdlpktamgweivpegiywilkkv
keeynppevyitengaafddvvsedgrvhdqnridylkahigqawkaiqegvplkgyfvw
slldnfewaegyskrfgivyvdystqkrivkdsgywysnvvknngled

    Sequence, based on observed residues (ATOM records): (download) 
    >5n6sA (A:)
vkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrwk
edieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyhw
dlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvhap
gmrdiyvafravhnllraharavkvfretvkdgkigivfnngyfepasekeediravrfm
hqfnnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkf
dpdapakvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvse
dgrvhdqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdys
tqkrivkdsgywysnvvknngle

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5n6sB (B:)
mgsshhhhhhssglvprgshmasnvkkfpegflwgvatasyqiegspladgagmsiwhtf
shtpgnvkngdtgdvacdhynrwkedieiieklgvkayrfsiswprilpegtgrvnqkgl
dfynriidtllekgitpfvtiyhwdlpfalqlkggwanreiadwfaeysrvlfenfgdrv
knwitlnepwvvaivghlygvhapgmrdiyvafravhnllraharavkvfretvkdgkig
ivfnngyfepasekeediravrfmhqfnnyplflnpiyrgdypelvlefareylpenykd
dmseiqekidfvglnyysghlvkfdpdapakvsfverdlpktamgweivpegiywilkkv
keeynppevyitengaafddvvsedgrvhdqnridylkahigqawkaiqegvplkgyfvw
slldnfewaegyskrfgivyvdystqkrivkdsgywysnvvknngled

    Sequence, based on observed residues (ATOM records): (download) 
    >5n6sB (B:)
vkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrwk
edieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyhw
dlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvhap
gmrdiyvafravhnllraharavkvfretvkdgkigivfnngyfepasekeediravrfm
hqfnnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkf
dpdapakvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvse
dgrvhdqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdys
tqkrivkdsgywysnvvknngle

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5n6sC (C:)
mgsshhhhhhssglvprgshmasnvkkfpegflwgvatasyqiegspladgagmsiwhtf
shtpgnvkngdtgdvacdhynrwkedieiieklgvkayrfsiswprilpegtgrvnqkgl
dfynriidtllekgitpfvtiyhwdlpfalqlkggwanreiadwfaeysrvlfenfgdrv
knwitlnepwvvaivghlygvhapgmrdiyvafravhnllraharavkvfretvkdgkig
ivfnngyfepasekeediravrfmhqfnnyplflnpiyrgdypelvlefareylpenykd
dmseiqekidfvglnyysghlvkfdpdapakvsfverdlpktamgweivpegiywilkkv
keeynppevyitengaafddvvsedgrvhdqnridylkahigqawkaiqegvplkgyfvw
slldnfewaegyskrfgivyvdystqkrivkdsgywysnvvknngled

    Sequence, based on observed residues (ATOM records): (download) 
    >5n6sC (C:)
kkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrwke
dieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyhwd
lpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvhapg
mrdiyvafravhnllraharavkvfretdgkigivfnngyfepasekeediravrfmhqf
nnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkfdpd
apakvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddgrvhdqn
rdylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdysvkdsgywys
nvvknngle

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5n6sD (D:)
mgsshhhhhhssglvprgshmasnvkkfpegflwgvatasyqiegspladgagmsiwhtf
shtpgnvkngdtgdvacdhynrwkedieiieklgvkayrfsiswprilpegtgrvnqkgl
dfynriidtllekgitpfvtiyhwdlpfalqlkggwanreiadwfaeysrvlfenfgdrv
knwitlnepwvvaivghlygvhapgmrdiyvafravhnllraharavkvfretvkdgkig
ivfnngyfepasekeediravrfmhqfnnyplflnpiyrgdypelvlefareylpenykd
dmseiqekidfvglnyysghlvkfdpdapakvsfverdlpktamgweivpegiywilkkv
keeynppevyitengaafddvvsedgrvhdqnridylkahigqawkaiqegvplkgyfvw
slldnfewaegyskrfgivyvdystqkrivkdsgywysnvvknngled

    Sequence, based on observed residues (ATOM records): (download) 
    >5n6sD (D:)
vkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrwk
edieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyhw
dlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvhap
gmrdiyvafravhnllraharavkvfretvkdgkigivfnngyfepasekediravrfmh
qfnnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkfd
pdapakvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvrvh
dqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdystqvky
wysnvvknngl