PDB entry 5msf

View 5msf on RCSB PDB site
Description: ms2 protein capsid/RNA complex
Class: Virus/RNA
Keywords: CAPSID PROTEIN MS2/RNA APTAMER COMPLEX, RNA-PROTEIN COMPLEX, RNA STEM LOOP, BACTERIOPHAGE MS2, Icosahedral virus
Deposited on 1998-05-15, released 1998-11-11
The last revision prior to the SCOP 1.73 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.188
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: ms2 protein capsid
  Species: BACTERIOPHAGE MS2
  Gene: COAT PROTEIN
  Database cross-references and differences (RAF-indexed):
  • Uniprot P03612 (0-128)
  Domains in SCOP 1.73: d5msfa_
• Chain 'B':
  Compound: ms2 protein capsid
  Species: BACTERIOPHAGE MS2
  Gene: COAT PROTEIN
  Database cross-references and differences (RAF-indexed):
  • Uniprot P03612 (0-128)
  Domains in SCOP 1.73: d5msfb_
• Chain 'C':
  Compound: ms2 protein capsid
  Species: BACTERIOPHAGE MS2
  Gene: COAT PROTEIN
  Database cross-references and differences (RAF-indexed):
  • Uniprot P03612 (0-128)
  Domains in SCOP 1.73: d5msfc_
• Chain 'R':
  Compound: 5'-r(*cp*cp*gp*gp*ap*gp*gp*ap*up*cp*ap*cp*cp*ap*cp*gp*gp*g)-3'
  Species: synthetic, synthetic
  
• Chain 'S':
  Compound: 5'-r(*cp*cp*gp*gp*ap*gp*gp*ap*up*cp*ap*cp*cp*ap*cp*gp*gp*g)-3'
  Species: synthetic, synthetic
  
• Heterogens: HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5msfA (A:)
  asnftqfvlvdnggtgdvtvapsnfangvaewissnsrsqaykvtcsvrqssaqnrkyti
  kvevpkvatqtvggvelpvaawrsylnmeltipifatnsdcelivkamqgllkdgnpips
  aiaansgiy
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5msfB (B:)
  asnftqfvlvdnggtgdvtvapsnfangvaewissnsrsqaykvtcsvrqssaqnrkyti
  kvevpkvatqtvggvelpvaawrsylnmeltipifatnsdcelivkamqgllkdgnpips
  aiaansgiy
  

  
  
• Chain 'C':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5msfC (C:)
  asnftqfvlvdnggtgdvtvapsnfangvaewissnsrsqaykvtcsvrqssaqnrkyti
  kvevpkvatqtvggvelpvaawrsylnmeltipifatnsdcelivkamqgllkdgnpips
  aiaansgiy
  

  
  
• Chain 'R':
  No sequence available.
  
  
• Chain 'S':
  No sequence available.