PDB entry 5mok

View 5mok on RCSB PDB site
Description: Crystal structure of human IgE-Fc epsilon 3-4
Class: immune system
Keywords: Immunoglobulin E, IgE, Antibody, immune system
Deposited on 2016-12-14, released 2018-01-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ig epsilon chain c region
    Species: Homo sapiens [TaxId:9606]
    Gene: IGHE
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01854
      • conflict (46)
      • conflict (58)
    Domains in SCOPe 2.08: d5moka1, d5moka2
  • Chain 'B':
    Compound: ig epsilon chain c region
    Species: Homo sapiens [TaxId:9606]
    Gene: IGHE
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01854
      • conflict (46)
      • conflict (58)
    Domains in SCOPe 2.08: d5mokb1, d5mokb2
  • Chain 'C':
    Compound: ig epsilon chain c region
    Species: Homo sapiens [TaxId:9606]
    Gene: IGHE
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01854
      • conflict (46)
      • conflict (58)
    Domains in SCOPe 2.08: d5mokc1, d5mokc2
  • Chain 'D':
    Compound: ig epsilon chain c region
    Species: Homo sapiens [TaxId:9606]
    Gene: IGHE
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01854
      • conflict (46)
      • conflict (58)
    Domains in SCOPe 2.08: d5mokd1, d5mokd2
  • Heterogens: PEG, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5mokA (A:)
adpcadsnprgvsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqh
strkeekqrngtltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraape
vyafatpewpgsrdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgff
vfsrlevtraeweqkdeficravheaaspsqtvqravsvnpgk

    Sequence, based on observed residues (ATOM records): (download) 
    >5mokA (A:)
vsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqhstrkeekqrng
tltvtstlpvgtrdwiegetyqcrvthphalmrsttktsgpraapevyafatpewpgsrd
krtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgffvfsrlevtraeweq
kdeficravheaaspsqtvqravsvnpg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5mokB (B:)
adpcadsnprgvsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqh
strkeekqrngtltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraape
vyafatpewpgsrdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgff
vfsrlevtraeweqkdeficravheaaspsqtvqravsvnpgk

    Sequence, based on observed residues (ATOM records): (download) 
    >5mokB (B:)
vsaylsrpspfdlfirksptitclvvdltvqltwsrasgkpvqhstrkeekqrngtltvt
stlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraapevyafatpewpgsrdkr
tlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgffvfsrlevtraeweqkd
eficravheaaspsqtvqravsvnp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5mokC (C:)
adpcadsnprgvsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqh
strkeekqrngtltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraape
vyafatpewpgsrdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgff
vfsrlevtraeweqkdeficravheaaspsqtvqravsvnpgk

    Sequence, based on observed residues (ATOM records): (download) 
    >5mokC (C:)
gvsaylsrpspfdlfirksptitclvvdtvqltwsrasgkpvqhstrkeekqrngtltvt
stlpvgtrdwiegetyqcrvtalmrsttktsgpraapevyafatpewpgsrdkrtlacli
qnfmpedisvqwlhnevqlpdarhsttqprktkgsgffvfsrlevtraeweqkdeficra
vheaaspsqtvqravsvn

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5mokD (D:)
adpcadsnprgvsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqh
strkeekqrngtltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraape
vyafatpewpgsrdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgff
vfsrlevtraeweqkdeficravheaaspsqtvqravsvnpgk

    Sequence, based on observed residues (ATOM records): (download) 
    >5mokD (D:)
vsaylsrpspfdlfirksptitclvvdlapstvqltwsrasgkpvqhstrkeekqrngtl
tvtstlpvgtrdwiegetyqcrvthalmrsttktsgpraapevyafatpewpgsrdkrtl
acliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgffvfsrlevtraeweqkdef
icravheaaspsqtvqravsvn