PDB entry 5mn9

View 5mn9 on RCSB PDB site
Description: Crystal structure of MINDY-1 tMIU in complex with K48-diUb
Class: hydrolase
Keywords: motif interacting with ubiquitin, ubiquitin binding domain, hydrolase and cysteine protease, hydrolase
Deposited on 2016-12-13, released 2017-01-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-08-30, with a file datestamp of 2017-08-25.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquitin-40S ribosomal protein S27a
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5mn9a_
  • Chain 'B':
    Compound: Ubiquitin-40S ribosomal protein S27a
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5mn9b_
  • Chain 'C':
    Compound: Ubiquitin carboxyl-terminal hydrolase MINDY-1
    Species: Homo sapiens [TaxId:9606]
    Gene: FAM63A, KIAA1390
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5mn9A (A:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgg
    

    Sequence, based on observed residues (ATOM records): (download)
    >5mn9A (A:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrl
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5mn9B (B:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgg
    

  • Chain 'C':
    No sequence available.