PDB entry 5m9m

View 5m9m on RCSB PDB site
Description: Human angiogenin PD variant Q77P
Class: hydrolase
Keywords: Parkinson's, RNase, angiogenesis, hydrolase
Deposited on 2016-11-01, released 2017-02-22
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-02-22, with a file datestamp of 2017-02-17.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: N/A
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: angiogenin
    Species: Homo sapiens [TaxId:9606]
    Gene: ANG, RNASE5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5m9ma_
  • Chain 'B':
    Compound: angiogenin
    Species: Homo sapiens [TaxId:9606]
    Gene: ANG, RNASE5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03950 (1-End)
      • variant (77)
    Domains in SCOPe 2.07: d5m9mb_
  • Chain 'C':
    Compound: angiogenin
    Species: Homo sapiens [TaxId:9606]
    Gene: ANG, RNASE5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5m9mc_
  • Chain 'D':
    Compound: angiogenin
    Species: Homo sapiens [TaxId:9606]
    Gene: ANG, RNASE5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5m9md_
  • Heterogens: SO4, PGE, EDO, BTB, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5m9mA (A:)
    mqdnsrythfltqhydakpqgrddrycesimrrrgltspckdintfihgnkrsikaicen
    kngnphrenlriskssfpvttcklhggspwppcqyratagfrnvvvacenglpvhldqsi
    frrp
    

    Sequence, based on observed residues (ATOM records): (download)
    >5m9mA (A:)
    nsrythfltqhydakpqgrddrycesimrrrgltspckdintfihgnkrsikaicenkng
    nphrenlriskssfpvttcklhggspwppcqyratagfrnvvvacenglpvhldqsifrr
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >5m9mB (B:)
    mqdnsrythfltqhydakpqgrddrycesimrrrgltspckdintfihgnkrsikaicen
    kngnphrenlriskssfpvttcklhggspwppcqyratagfrnvvvacenglpvhldqsi
    frrp
    

    Sequence, based on observed residues (ATOM records): (download)
    >5m9mB (B:)
    qdnsrythfltqhydakpqgrddrycesimrrrgltspckdintfihgnkrsikaicenk
    ngnphrenlriskssfpvttcklhggspwppcqyratagfrnvvvacenglpvhldqsif
    r
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >5m9mC (C:)
    mqdnsrythfltqhydakpqgrddrycesimrrrgltspckdintfihgnkrsikaicen
    kngnphrenlriskssfpvttcklhggspwppcqyratagfrnvvvacenglpvhldqsi
    frrp
    

    Sequence, based on observed residues (ATOM records): (download)
    >5m9mC (C:)
    nsrythfltqhydakpqgrddrycesimrrrgltspckdintfihgnkrsikaicenkng
    npnlriskssfpvttcklhggspwppcqyratagfrnvvvacenglpvhldqsifr
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >5m9mD (D:)
    mqdnsrythfltqhydakpqgrddrycesimrrrgltspckdintfihgnkrsikaicen
    kngnphrenlriskssfpvttcklhggspwppcqyratagfrnvvvacenglpvhldqsi
    frrp
    

    Sequence, based on observed residues (ATOM records): (download)
    >5m9mD (D:)
    nsrythfltqhydakpqgrddrycesimrrrgltspckdintfihgnkrsikaicenkng
    nphrenlriskssfpvttcklhggspwppcqyratagfrnvvvacenglpvhldqsifr