PDB entry 5m2w
View 5m2w on RCSB PDB site
Description: Structure of nanobody nb18 raised against TssK from E. coli T6SS
Class: immune system
Keywords: T6SS TssK nanobody, immune system
Deposited on
2016-10-13, released
2017-06-28
The last revision prior to the SCOPe 2.06 freeze date was dated
2017-06-28, with a file datestamp of
2017-06-23.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Llama nanobody nb8 against TssK from T6SS
Species: LAMA GLAMA [TaxId:9844]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5m2wa1, d5m2wa2 - Chain 'B':
Compound: Llama nanobody nb8 against TssK from T6SS
Species: LAMA GLAMA [TaxId:9844]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5m2wb1, d5m2wb2 - Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5m2wA (A:)
qvqlvesggglvqaggtlklscaasgsisgivvmawyrqapgkqrelvasitsggttnya
dsvkgrftiskdnaentlylrmnslkpedtavyyckaffrrdyvgydywgqgtqvtvssh
hhhhh
Sequence, based on observed residues (ATOM records): (download)
>5m2wA (A:)
qvqlvesggglvqaggtlklscaasgsgivvmawyrqapgkqrelvasitsggttnyads
vkgrftiskdnaentlylrmnslkpedtavyyckaffrrdyvgydywgqgtqvtvss
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5m2wB (B:)
qvqlvesggglvqaggtlklscaasgsisgivvmawyrqapgkqrelvasitsggttnya
dsvkgrftiskdnaentlylrmnslkpedtavyyckaffrrdyvgydywgqgtqvtvssh
hhhhh
Sequence, based on observed residues (ATOM records): (download)
>5m2wB (B:)
qvqlvesggglvqaggtlklscaasgsisgivvmawyrqapgkqrelvasitsggttnya
dsvkgrftiskdnaentlylrmnslkpedtavyyckaffrrdyvgydywgqgtqvtvss