PDB entry 5m16

View 5m16 on RCSB PDB site
Description: Structure of GH36 alpha-galactosidase from Thermotoga maritima in complex with a hydrolysed cyclopropyl carbasugar.
Class: hydrolase
Keywords: Alpha-galactosidase, glycoside hydrolase, hydrolase
Deposited on 2016-10-07, released 2016-11-09
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-11-30, with a file datestamp of 2016-11-25.
Experiment type: XRAY
Resolution: 1.62 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: alpha-galactosidase
    Species: Thermotoga maritima [TaxId:2336]
    Gene: galA
    Database cross-references and differences (RAF-indexed):
    • Uniprot O33835 (23-End)
      • expression tag (15-22)
    Domains in SCOPe 2.07: d5m16a1, d5m16a2, d5m16a3
  • Heterogens: SO4, MG, 7D2, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5m16A (A:)
mgsshhhhhhssglvprgshmasmeifgktfregrfvlkeknftvefavekihlgwkisg
rvkgspgrlevlrtkapekvlvnnwqswgpcrvvdafsfkppeidpnwrytasvvpdvle
rnlqsdyfvaeegkvygflsskiahpffavedgelvayleyfdvefddfvpleplvvled
pntplllekyaelvgmennarvpkhtptgwcswyhyfldltweetlknlklaknfpfevf
qiddayekdigdwlvtrgdfpsveemakviaengfipgiwtapfsvsetsdvfnehpdwv
vkengepkmayrnwnkkiyaldlskdevlnwlfdlfsslrkmgyryfkidflfagavpge
rkknitpiqafrkgietirkavgedsfilgcgspllpavgcvdgmrigpdtapfwgehie
dngapaarwalrnaitryfmhdrfwlndpdclilreektdltqkekelysytcgvldnmi
iesddlslvrdhgkkvlketlellggrprvqnimsedlryeivssgtlsgnvkivvdlns
reyhlekegksslkkrvvkredgrnfyfyeegere

    Sequence, based on observed residues (ATOM records): (download) 
    >5m16A (A:)
prgshmasmeifgktfregrfvlkeknftvefavekihlgwkisgrvkgspgrlevlrtk
apekvlvnnwqswgpcrvvdafsfkppeidpnwrytasvvpdvlernlqsdyfvaeegkv
ygflsskiahpffavedgelvayleyfdvefddfvpleplvvledpntplllekyaelvg
mennarvpkhtptgwcswyhyfldltweetlknlklaknfpfevfqiddayekdigdwlv
trgdfpsveemakviaengfipgiwtapfsvsetsdvfnehpdwvvkengepkmayrnwn
kkiyaldlskdevlnwlfdlfsslrkmgyryfkidflfagavpgerkknitpiqafrkgi
etirkavgedsfilgcgspllpavgcvdgmrigpdtapfwgehiedngapaarwalrnai
tryfmhdrfwlndpdclilreektdltqkekelysytcgvldnmiiesddlslvrdhgkk
vlketlellggrprvqnimsedlryeivssgtlsgnvkivvdlnsreyhleke