PDB entry 5llb

View 5llb on RCSB PDB site
Description: structure of polyphosphate kinase 2 from francisella tularensis with amppch2ppp and polyphosphate
Deposited on 2016-07-27, released 2017-10-11
The last revision was dated 2019-10-16, with a file datestamp of 2019-10-11.
Experiment type: XRAY
Resolution: 1.92 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Polyphosphate kinase 2
    Species: Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4) [TaxId:177416]
    Gene: ppk2, FTT_1564, BZ14_1190
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Polyphosphate kinase 2
    Species: Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4) [TaxId:177416]
    Gene: ppk2, FTT_1564, BZ14_1190
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Polyphosphate kinase 2
    Species: Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4) [TaxId:177416]
    Gene: ppk2, FTT_1564, BZ14_1190
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Polyphosphate kinase 2
    Species: Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4) [TaxId:177416]
    Gene: ppk2, FTT_1564, BZ14_1190
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CL, MG, 6YZ, 6YW, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.07, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >5llbA (A:)
    mkvlsqeerqklflenifpykhkiprnvyekqkhylqiellkfqkwvkennkkvliifeg
    rdaagkggtikrmmehlnprgakvialekpseqernqwyfqryiehlpsggeivlfdrsw
    ynragvervmgfctereyflfleqapqlekmlvdsgtmiikfwfsvsqqeqknrfaares
    hplkqwklspidkasldkwddyteakermfiytdkpyapwvivksddkkrarlnairyil
    nnvdydnkdhevaippdplivgtsskiyk
    

    Sequence, based on observed residues (ATOM records):
    >5llbA (A:)
    iprnvyekqkhylqiellkfqkwvkennkkvliifegrdaagkggtikrmmehlnprgak
    vialekpseqernqwyfqryiehlpsggeivlfdrswynragvervmgfctereyflfle
    qapqlekmlvdsgtmiikfwfsvsqqeqknrfaareshplkqwklspidkasldkwddyt
    eakermfiytdkpyapwvivksddkkrarlnairyilnnvdydnkdhevaippdplivgt
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >5llbB (B:)
    mkvlsqeerqklflenifpykhkiprnvyekqkhylqiellkfqkwvkennkkvliifeg
    rdaagkggtikrmmehlnprgakvialekpseqernqwyfqryiehlpsggeivlfdrsw
    ynragvervmgfctereyflfleqapqlekmlvdsgtmiikfwfsvsqqeqknrfaares
    hplkqwklspidkasldkwddyteakermfiytdkpyapwvivksddkkrarlnairyil
    nnvdydnkdhevaippdplivgtsskiyk
    

    Sequence, based on observed residues (ATOM records):
    >5llbB (B:)
    iprnvyekqkhylqiellkfqkwvkennkkvliifegrdaagkggtikrmmehlnprgak
    vialekpseqernqwyfqryiehlpsggeivlfdrswynragvervmgfctereyflfle
    qapqlekmlvdsgtmiikfwfsvsqqeqknrfaareshplkqwklspidkasldkwddyt
    eakermfiytdkpyapwvivksddkkrarlnairyilnnvdydnkdhevaippdplivgt
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >5llbC (C:)
    mkvlsqeerqklflenifpykhkiprnvyekqkhylqiellkfqkwvkennkkvliifeg
    rdaagkggtikrmmehlnprgakvialekpseqernqwyfqryiehlpsggeivlfdrsw
    ynragvervmgfctereyflfleqapqlekmlvdsgtmiikfwfsvsqqeqknrfaares
    hplkqwklspidkasldkwddyteakermfiytdkpyapwvivksddkkrarlnairyil
    nnvdydnkdhevaippdplivgt
    

    Sequence, based on observed residues (ATOM records):
    >5llbC (C:)
    iprnvyekqkhylqiellkfqkwvkennkkvliifegrdaagkggtikrmmehlnprgak
    vialekpseqernqwyfqryiehlpsggeivlfdrswynragvervmgfctereyflfle
    qapqlekmlvdsgtmiikfwfsvsqqeqknrfaareshplkqwklspidkasldkwddyt
    eakermfiytdkpyapwvivksddkkrarlnairyilnnvdydnkdhevaippdplivgt
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >5llbD (D:)
    mkvlsqeerqklflenifpykhkiprnvyekqkhylqiellkfqkwvkennkkvliifeg
    rdaagkggtikrmmehlnprgakvialekpseqernqwyfqryiehlpsggeivlfdrsw
    ynragvervmgfctereyflfleqapqlekmlvdsgtmiikfwfsvsqqeqknrfaares
    hplkqwklspidkasldkwddyteakermfiytdkpyapwvivksddkkrarlnairyil
    nnvdydnkdhevaippdplivgt
    

    Sequence, based on observed residues (ATOM records):
    >5llbD (D:)
    iprnvyekqkhylqiellkfqkwvkennkkvliifegrdaagkggtikrmmehlnprgak
    vialekpseqernqwyfqryiehlpsggeivlfdrswynragvervmgfctereyflfle
    qapqlekmlvdsgtmiikfwfsvsqqeqknrfaareshplkqwklspidkasldkwddyt
    eakermfiytdkpyapwvivksddkkrarlnairyilnnvdydnkdhevaippdplivgt