PDB entry 5lfg
View 5lfg on RCSB PDB site
Description: X-ray structure of a new fully ligated carbomonoxy form of Trematomus newnesi hemoglobin (Hb1TnCO).
Class: oxygen transport
Keywords: OXYGEN TRANSPORT, globin fold
Deposited on
2016-07-01, released
2017-08-09
The last revision prior to the SCOPe 2.06 freeze date was dated
2017-08-09, with a file datestamp of
2017-08-04.
Experiment type: XRAY
Resolution: 1.94 Å
R-factor: N/A
AEROSPACI score: 0.32
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hemoglobin subunit alpha-1
Species: Trematomus newnesi [TaxId:35730]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5lfga_ - Chain 'B':
Compound: Hemoglobin subunit beta-1/2
Species: Trematomus newnesi [TaxId:35730]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5lfgb_ - Chain 'C':
Compound: Hemoglobin subunit alpha-1
Species: Trematomus newnesi [TaxId:35730]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5lfgc_ - Chain 'D':
Compound: Hemoglobin subunit beta-1/2
Species: Trematomus newnesi [TaxId:35730]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5lfgd_ - Heterogens: CMO, HEM, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>5lfgA (A:)
slsdkdkaavralwskigkssdaigndalsrmivvypqtkiyfshwpdvtpgspnikahg
kkvmggialavskiddlktglmelseqhayklrvdpsnfkilnhcilvvistmfpkeftp
eahvsldkflsgvalalaeryr
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>5lfgB (B:)
vewtdkersiisdifshmdyddigpkalsrclvvypwtqryfsgfgnlynaegimsnanv
aahgikvlhgldrgmknmdniadaytdlstlhseklhvdpdnfkllsdcitivlaakmgh
aftaetqgafqkflaavvsalgkqyh
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>5lfgC (C:)
slsdkdkaavralwskigkssdaigndalsrmivvypqtkiyfshwpdvtpgspnikahg
kkvmggialavskiddlktglmelseqhayklrvdpsnfkilnhcilvvistmfpkeftp
eahvsldkflsgvalalaeryr
- Chain 'D':
Sequence, based on SEQRES records: (download)
>5lfgD (D:)
vewtdkersiisdifshmdyddigpkalsrclvvypwtqryfsgfgnlynaegimsnanv
aahgikvlhgldrgmknmdniadaytdlstlhseklhvdpdnfkllsdcitivlaakmgh
aftaetqgafqkflaavvsalgkqyh
Sequence, based on observed residues (ATOM records): (download)
>5lfgD (D:)
vewtdkersiisdifshmdyddigpkalsrclvvypwtqryfsgfgnlygimsnanvaah
gikvlhgldrgmknmdniadaytdlstlhseklhvdpdnfkllsdcitivlaakmghaft
aetqgafqkflaavvsalgkqy