PDB entry 5lbv

View 5lbv on RCSB PDB site
Description: Structural basis of zika and dengue virus potent antibody cross-neutralization
Class: viral protein
Keywords: Immune system-viral protein complex, zika virus, broadly neutralizing antibody, viral protein
Deposited on 2016-06-17, released 2016-07-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Envelope protein E
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5lbva1, d5lbva2
  • Chain 'B':
    Compound: Envelope protein E
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5lbvb1, d5lbvb2
  • Heterogens: NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5lbvA (A:)
ircigvsnrdfvegmsggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsyc
yeasisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfa
cskkmtgksiqpenleyrimlsvhgsqhsgmivndtghetdenrakveitpnspraeatl
ggfgslgldceprtgldfsdlyyltmnnkhwlvhkewfhdiplpwhagadtgtphwnnke
alvefkdahakrqtvvvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrl
kgvsyslctaaftftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgrlit
anpvitestenskmmleldppfgdsyivigvgekkithhwhrsgstiggpfeddddkagw
shpqfekgggsgggsgggswshpqfek

    Sequence, based on observed residues (ATOM records): (download) 
    >5lbvA (A:)
ircigvsnrdfveggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsycyea
sisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfacsk
kmtgksiqpenleyrimlsvhgsqhsgmidtghetdenrakveitpnspraeatlggfgs
lgldceprtgdlyyltmnnkhwlvhkewfhdiplpwhagtphwnnkealvefkdahakrq
tvvvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrlkgvsyslctaaft
ftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgrlitanpvitestensk
mmleldppfgdsyivigvgekkithhwhrs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5lbvB (B:)
ircigvsnrdfvegmsggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsyc
yeasisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfa
cskkmtgksiqpenleyrimlsvhgsqhsgmivndtghetdenrakveitpnspraeatl
ggfgslgldceprtgldfsdlyyltmnnkhwlvhkewfhdiplpwhagadtgtphwnnke
alvefkdahakrqtvvvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrl
kgvsyslctaaftftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgrlit
anpvitestenskmmleldppfgdsyivigvgekkithhwhrsgstiggpfeddddkagw
shpqfekgggsgggsgggswshpqfek

    Sequence, based on observed residues (ATOM records): (download) 
    >5lbvB (B:)
ircigvsnrdfvegmsggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsyc
yeasisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfa
cskkmtgksiqpenleyrimlsvhgsqhsgmivndtghetdenrakveitpnspraeatl
ggfgslgldcepfsdlyyltmnnkhwlvhkewfhdiplpwhagaphwnnkealvefkdah
akrqtvvvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrlkgvsyslct
aaftftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgrlitanpvitest
enskmmleldppfgdsyivigvgekkithhwhrs