PDB entry 5l6q

View 5l6q on RCSB PDB site
Description: Refolded AL protein from cardiac amyloidosis
Class: immune system
Keywords: Antibody, light chain, systemic AL amyloidosis, amyloid fibrils, immune system
Deposited on 2016-05-31, released 2017-05-31
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-06-21, with a file datestamp of 2017-06-16.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: N/A
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: h5al
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5L6Q (0-End)
    Domains in SCOPe 2.08: d5l6qa_
  • Chain 'B':
    Compound: h5al
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5L6Q (0-End)
    Domains in SCOPe 2.08: d5l6qb_
  • Heterogens: ZN, NA, CO3, PEG, CL, PGE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5l6qA (A:)
seltqdpavsvalgqtvritcqgdslrsysaswyqqkpgqapvlvifrksnrpsgipdrf
sgsssgntasltitgaqaedeadyycnsrdssanhqvfgggtkltvlgqpkaaps

    Sequence, based on observed residues (ATOM records): (download) 
    >5l6qA (A:)
seltqdpavsvalgqtvritcqgdslrsysaswyqqkpgqapvlvifrksnrpsgipdrf
sgsssgntasltitgaqaedeadyycnsrdssanhqvfgggtkltvlg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5l6qB (B:)
seltqdpavsvalgqtvritcqgdslrsysaswyqqkpgqapvlvifrksnrpsgipdrf
sgsssgntasltitgaqaedeadyycnsrdssanhqvfgggtkltvlgqpkaaps

    Sequence, based on observed residues (ATOM records): (download) 
    >5l6qB (B:)
seltqdpavsvalgqtvritcqgdslrsysaswyqqkpgqapvlvifrksnrpsgipdrf
sgsssgntasltitgaqaedeadyycnsrdssanhqvfgggtkltvlg