PDB entry 5l3d
View 5l3d on RCSB PDB site
Description: Human LSD1/CoREST: LSD1 Y761H mutation
Class: oxidoreductase/repressor
Keywords: OXIDOREDUCTASE-REPRESSOR complex, Histone demethylase, chromatin, flavin, FAD
Deposited on
2016-04-06, released
2016-05-04
The last revision prior to the SCOPe 2.08 freeze date was dated
2016-12-07, with a file datestamp of
2016-12-02.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.2
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Lysine-specific histone demethylase 1A
Species: Homo sapiens [TaxId:9606]
Gene: KDM1A, AOF2, KDM1, KIAA0601, LSD1
Database cross-references and differences (RAF-indexed):
- Uniprot O60341
- engineered mutation (760)
- Chain 'B':
Compound: rest corepressor 1
Species: Homo sapiens [TaxId:9606]
Gene: RCOR1, KIAA0071, RCOR
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5l3db1, d5l3db2 - Heterogens: FAD, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5l3dB (B:)
mvekgpevsgkrrgrnnaaasasaaaasaaasaacaspaataasgaaassasaaaasaaa
apnngqnkslaaaapngnsssnsweegssgsssdeehggggmrvgpqyqavvpdfdpakl
arrsqerdnlgmlvwspnqnlseakldeyiaiakekhgynmeqalgmlfwhkhnieksla
dlpnftpfpdewtvedkvlfeqafsfhgktfhriqqmlpdksiaslvkfyyswkktrtkt
svmdrharkqkrereesedeleeangnnpidievdqnkeskkevpptetvpqvkkekhst
qaknrakrkppkgmflsqedveavsanataattvlrqldmelvsvkrqiqnikqtnsalk
ekldggiepyrlpeviqkcnarwtteeqllavqairkygrdfqaisdvignksvvqvknf
fvnyrrrfnidevlqeweaehgkeetngpsnqkpvkspdnsikmpeeedeapvldvryas
as
Sequence, based on observed residues (ATOM records): (download)
>5l3dB (B:)
rkppkgmflsqedveavsanataattvlrqldmelvsvkrqiqnikqtnsalkekldggi
epyrlpeviqkcnarwtteeqllavqairkygrdfqaisdvignksvvqvknffvnyrrr
fnidevlqeweae