PDB entry 5l38

View 5l38 on RCSB PDB site
Description: The structure of the hexagonal shell protein MSM0272 from the RMM microcompartment
Class: structural protein
Keywords: Bacterial microcompartment, hexameric shell protein, STRUCTURAL PROTEIN
Deposited on 2016-08-03, released 2016-12-14
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-02-01, with a file datestamp of 2017-01-26.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: MSM0272 - RMM microcompartment shell protein
    Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_0272, MSMEI_0265
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5l38a_
  • Chain 'B':
    Compound: MSM0272 - RMM microcompartment shell protein
    Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_0272, MSMEI_0265
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5l38b_
  • Chain 'C':
    Compound: MSM0272 - RMM microcompartment shell protein
    Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_0272, MSMEI_0265
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5l38c_
  • Chain 'D':
    Compound: MSM0272 - RMM microcompartment shell protein
    Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_0272, MSMEI_0265
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5l38d_
  • Chain 'E':
    Compound: MSM0272 - RMM microcompartment shell protein
    Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_0272, MSMEI_0265
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5l38e_
  • Chain 'F':
    Compound: MSM0272 - RMM microcompartment shell protein
    Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_0272, MSMEI_0265
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5l38f_
  • Chain 'G':
    Compound: MSM0272 - RMM microcompartment shell protein
    Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_0272, MSMEI_0265
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5l38g_
  • Chain 'H':
    Compound: MSM0272 - RMM microcompartment shell protein
    Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_0272, MSMEI_0265
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5l38h_
  • Chain 'I':
    Compound: MSM0272 - RMM microcompartment shell protein
    Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_0272, MSMEI_0265
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5l38i_
  • Chain 'J':
    Compound: MSM0272 - RMM microcompartment shell protein
    Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_0272, MSMEI_0265
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5l38j_
  • Chain 'K':
    Compound: MSM0272 - RMM microcompartment shell protein
    Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_0272, MSMEI_0265
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5l38k_
  • Chain 'L':
    Compound: MSM0272 - RMM microcompartment shell protein
    Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_0272, MSMEI_0265
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5l38l_
  • Heterogens: NA, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5l38A (A:)
mssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaatea
gaetasqvgelvsvhviprphselgahfsvssklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5l38A (A:)
ssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaateag
aetasqvgelvsvhviprphselgahfsvss

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5l38B (B:)
mssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaatea
gaetasqvgelvsvhviprphselgahfsvssklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5l38B (B:)
snaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaateaga
etasqvgelvsvhviprphselgahf

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5l38C (C:)
mssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaatea
gaetasqvgelvsvhviprphselgahfsvssklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5l38C (C:)
ssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaateag
aetasqvgelvsvhviprphselgahfsvs

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5l38D (D:)
mssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaatea
gaetasqvgelvsvhviprphselgahfsvssklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5l38D (D:)
snaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaateaga
etasqvgelvsvhviprphselgahfsvs

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5l38E (E:)
mssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaatea
gaetasqvgelvsvhviprphselgahfsvssklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5l38E (E:)
naiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaateagae
tasqvgelvsvhviprphselgahf

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5l38F (F:)
mssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaatea
gaetasqvgelvsvhviprphselgahfsvssklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5l38F (F:)
ssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaateag
aetasqvgelvsvhviprphselgahfsvs

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >5l38G (G:)
mssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaatea
gaetasqvgelvsvhviprphselgahfsvssklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5l38G (G:)
ssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaateag
aetasqvgelvsvhviprphselgahfsvs

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >5l38H (H:)
mssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaatea
gaetasqvgelvsvhviprphselgahfsvssklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5l38H (H:)
snaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaateaga
etasqvgelvsvhviprphselgahfsv

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >5l38I (I:)
mssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaatea
gaetasqvgelvsvhviprphselgahfsvssklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5l38I (I:)
snaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaateaga
etasqvgelvsvhviprphselgahfs

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >5l38J (J:)
mssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaatea
gaetasqvgelvsvhviprphselgahfsvssklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5l38J (J:)
snaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaateaga
etasqvgelvsvhviprphselgahfsvs

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >5l38K (K:)
mssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaatea
gaetasqvgelvsvhviprphselgahfsvssklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5l38K (K:)
snaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaateaga
etasqvgelvsvhviprphselgahf

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >5l38L (L:)
mssnaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaatea
gaetasqvgelvsvhviprphselgahfsvssklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5l38L (L:)
snaiglietkgyvaalaaadamvkaanvtitdrqqvgdglvavivtgevgavkaateaga
etasqvgelvsvhviprphselgahf