PDB entry 5kyo

View 5kyo on RCSB PDB site
Description: Crystal Structure of CYP101J2
Class: oxidoreductase
Keywords: cytochrome P450 monooxygenase, 1, 8-cineole hydroxylation, OXIDOREDUCTASE
Deposited on 2016-07-22, released 2017-01-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-04-26, with a file datestamp of 2017-04-21.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cyp101j2
    Species: Sphingobium yanoikuyae [TaxId:13690]
    Database cross-references and differences (RAF-indexed):
    • PDB 5KYO (Start-429)
    Domains in SCOPe 2.08: d5kyoa_
  • Chain 'B':
    Compound: cyp101j2
    Species: Sphingobium yanoikuyae [TaxId:13690]
    Database cross-references and differences (RAF-indexed):
    • PDB 5KYO (Start-429)
    Domains in SCOPe 2.08: d5kyob_
  • Chain 'C':
    Compound: cyp101j2
    Species: Sphingobium yanoikuyae [TaxId:13690]
    Database cross-references and differences (RAF-indexed):
    • PDB 5KYO (Start-429)
    Domains in SCOPe 2.08: d5kyoc_
  • Chain 'D':
    Compound: cyp101j2
    Species: Sphingobium yanoikuyae [TaxId:13690]
    Database cross-references and differences (RAF-indexed):
    • PDB 5KYO (Start-429)
    Domains in SCOPe 2.08: d5kyod_
  • Chain 'E':
    Compound: cyp101j2
    Species: Sphingobium yanoikuyae [TaxId:13690]
    Database cross-references and differences (RAF-indexed):
    • PDB 5KYO (Start-429)
    Domains in SCOPe 2.08: d5kyoe_
  • Chain 'F':
    Compound: cyp101j2
    Species: Sphingobium yanoikuyae [TaxId:13690]
    Database cross-references and differences (RAF-indexed):
    • PDB 5KYO (Start-429)
    Domains in SCOPe 2.08: d5kyof_
  • Heterogens: HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5kyoA (A:)
mgsshhhhhhssglvprgshmeasvkgaagqmterpdnvpadrvfdfdiyrdvpegldfh
qswreimrqaphplmwtphngghwvalrsdlaetvmsdferfsnhtvlvpketageayrl
iplsldppehrpfrsllnenlgpkplrpieqvvtdlavsliegfrpkgrcnfthefaeql
pvrifmrivdlpvedlpklkhladqytrpdgsiplddvtkqfreylrpviearrikpged
misrmingevggrpltdieaeniciqvlvggldtvvnmlgftfshlakdhalrraiaadp
sliddalleffrrfpvvssarevlrdqefegvllkagdmvmaptvvvamddarnedplef
rlgrkarqhstfgkgshtcpgahlarmemkvvlrewfaripefrieddaplrysngivgs
vkpfvlewpv

    Sequence, based on observed residues (ATOM records): (download) 
    >5kyoA (A:)
mterpdnvpadrvfdfdiyrdvpegldfhqswreimrqaphplmwtphngghwvalrsdl
aetvmsdferfsnhtvlvpketageayrliplsldppehrpfrsllnenlgpkplrpieq
vvtdlavsliegfrpkgrcnfthefaeqlpvrifmrivdlpvedlpklkhladqytipld
dvtkqfreylrpviearrikpgedmisrmingevggrpltdieaeniciqvlvggldtvv
nmlgftfshlakdhalrraiaadpsliddalleffrrfpvvssarevlrdqefegvllka
gdmvmaptvvvamddarnedplefrlgrkarqhstfgkgshtcpgahlarmemkvvlrew
faripefrieddaplrysngivgsvkpfvlewpv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5kyoB (B:)
mgsshhhhhhssglvprgshmeasvkgaagqmterpdnvpadrvfdfdiyrdvpegldfh
qswreimrqaphplmwtphngghwvalrsdlaetvmsdferfsnhtvlvpketageayrl
iplsldppehrpfrsllnenlgpkplrpieqvvtdlavsliegfrpkgrcnfthefaeql
pvrifmrivdlpvedlpklkhladqytrpdgsiplddvtkqfreylrpviearrikpged
misrmingevggrpltdieaeniciqvlvggldtvvnmlgftfshlakdhalrraiaadp
sliddalleffrrfpvvssarevlrdqefegvllkagdmvmaptvvvamddarnedplef
rlgrkarqhstfgkgshtcpgahlarmemkvvlrewfaripefrieddaplrysngivgs
vkpfvlewpv

    Sequence, based on observed residues (ATOM records): (download) 
    >5kyoB (B:)
terpdnvpadrvfdfdiyrdvpegldfhqswreimrqphplmwtphngghwvalrsdlae
tvmsdferfsnhtvlvpketageayrliplsldppehrpfrsllnenlgpkplrpieqvv
tdlavsliegfrpkgrcnfthefaeqlpvrifmrivdlpvedlpklkhladqytripldd
vtkqfreylrpviearrikpgedmisrmingevggrpltdieaeniciqvlvggldtvvn
mlgftfshlakdhalrraiaadpsliddalleffrrfpvvssarevlrdqefegvllkag
dmvmaptvvvamddarnedplefrlgrkarqhstfgkgshtcpgahlarmemkvvlrewf
aripefrieddaplrysngivgsvkpfvlewpv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5kyoC (C:)
mgsshhhhhhssglvprgshmeasvkgaagqmterpdnvpadrvfdfdiyrdvpegldfh
qswreimrqaphplmwtphngghwvalrsdlaetvmsdferfsnhtvlvpketageayrl
iplsldppehrpfrsllnenlgpkplrpieqvvtdlavsliegfrpkgrcnfthefaeql
pvrifmrivdlpvedlpklkhladqytrpdgsiplddvtkqfreylrpviearrikpged
misrmingevggrpltdieaeniciqvlvggldtvvnmlgftfshlakdhalrraiaadp
sliddalleffrrfpvvssarevlrdqefegvllkagdmvmaptvvvamddarnedplef
rlgrkarqhstfgkgshtcpgahlarmemkvvlrewfaripefrieddaplrysngivgs
vkpfvlewpv

    Sequence, based on observed residues (ATOM records): (download) 
    >5kyoC (C:)
terpdnvpadrvfdfdiyrdvpegldfhqswreimrqapplmwtphngghwvalrsdlae
tvmsdferfsnhtvlvpketageayrliplsldppehrpfrsllnenlgpkplrpieqvv
tdlavsliegfrpkgrcnfthefaeqlpvrifmrivdlpvedlpklkhladqytlddvtk
qfreylrpviearrikpgedmisrmingevggrpltdieaeniciqvlvggldtvvnmlg
ftfshlakdhalrraiaadpsliddalleffrrfpvvssarevlrdqefegvllkagdmv
maptvvvamddarnedplefrlgrkarqhstfgkgshtcpgahlarmemkvvlrewfari
pefrieddaplrysngivgsvkpfvlewpv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5kyoD (D:)
mgsshhhhhhssglvprgshmeasvkgaagqmterpdnvpadrvfdfdiyrdvpegldfh
qswreimrqaphplmwtphngghwvalrsdlaetvmsdferfsnhtvlvpketageayrl
iplsldppehrpfrsllnenlgpkplrpieqvvtdlavsliegfrpkgrcnfthefaeql
pvrifmrivdlpvedlpklkhladqytrpdgsiplddvtkqfreylrpviearrikpged
misrmingevggrpltdieaeniciqvlvggldtvvnmlgftfshlakdhalrraiaadp
sliddalleffrrfpvvssarevlrdqefegvllkagdmvmaptvvvamddarnedplef
rlgrkarqhstfgkgshtcpgahlarmemkvvlrewfaripefrieddaplrysngivgs
vkpfvlewpv

    Sequence, based on observed residues (ATOM records): (download) 
    >5kyoD (D:)
erpdnvpadrvfdfdiyrdvpgldfhqswreimrphplmwtphngghwvalrsdlaetvm
sdferfsnhtvlvpketageayrliplsldppehrpfrsllnenlgpkplrpieqvvtdl
avsliegfrpkgrcnfthefaeqlpvrifmrivdlpvedlpklkhladqytrpdplddvt
kqfreylrpviearrikpgedmisrminltdieaeniciqvlvggldtvvnmlgftfshl
akdhalrraiaadpsliddalleffrrfpvvssarevlrdqefegvllkagdmvmaptvv
vamddarnedplefrlgrkarqhstfgkgshtcpgahlarmemkvvlrewfaripefrie
ddaplrysngivgsvkpfvlewpv

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5kyoE (E:)
mgsshhhhhhssglvprgshmeasvkgaagqmterpdnvpadrvfdfdiyrdvpegldfh
qswreimrqaphplmwtphngghwvalrsdlaetvmsdferfsnhtvlvpketageayrl
iplsldppehrpfrsllnenlgpkplrpieqvvtdlavsliegfrpkgrcnfthefaeql
pvrifmrivdlpvedlpklkhladqytrpdgsiplddvtkqfreylrpviearrikpged
misrmingevggrpltdieaeniciqvlvggldtvvnmlgftfshlakdhalrraiaadp
sliddalleffrrfpvvssarevlrdqefegvllkagdmvmaptvvvamddarnedplef
rlgrkarqhstfgkgshtcpgahlarmemkvvlrewfaripefrieddaplrysngivgs
vkpfvlewpv

    Sequence, based on observed residues (ATOM records): (download) 
    >5kyoE (E:)
rpdnvpadrvfdfdiyrdvpldfhqswreimrqaphplmwtphngghwvalrsdlaetvm
sdferfsnhtvlvpketageayrliplsldppehrpfrsllnenlgpkplrpieqvvtdl
avsliegfrpkgrcnfthefaeqlpvrifmrivdlpvedlpklkhladqytrpdgplddv
tkqfreylrpviearrikpgedmisrmingevggltdieaeniciqvlvggldtvvnmlg
ftfshlakdhalrraiaadpsliddalleffrrfpvvssarevlrdqefegvllkagdmv
maptvvvamddarnedplefrlgrkarqhstfgkgshtcpgahlarmemkvvlrewfari
pefrieddaplrysngivgsvkpfvlewpv

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5kyoF (F:)
mgsshhhhhhssglvprgshmeasvkgaagqmterpdnvpadrvfdfdiyrdvpegldfh
qswreimrqaphplmwtphngghwvalrsdlaetvmsdferfsnhtvlvpketageayrl
iplsldppehrpfrsllnenlgpkplrpieqvvtdlavsliegfrpkgrcnfthefaeql
pvrifmrivdlpvedlpklkhladqytrpdgsiplddvtkqfreylrpviearrikpged
misrmingevggrpltdieaeniciqvlvggldtvvnmlgftfshlakdhalrraiaadp
sliddalleffrrfpvvssarevlrdqefegvllkagdmvmaptvvvamddarnedplef
rlgrkarqhstfgkgshtcpgahlarmemkvvlrewfaripefrieddaplrysngivgs
vkpfvlewpv

    Sequence, based on observed residues (ATOM records): (download) 
    >5kyoF (F:)
erpdnvpadrvfdfdiyrdvpegldfhqswreplmwtphngghwvalrsdlaetvmsdfe
rfsnhtvlvpketageayrliplsldppehrpfrsllnenlgpkplrpieqvvtdlavsl
iegfrpkgrcnfthefaeqlpvrifmrivdlpvedlpklkhladqytplddvtkqfreyl
rpviearrikpgedmisrmingevggpltdieaeniciqvlvggldtvvnmlgftfshla
kdhalrraiaadpsliddalleffrrfpvvssarevlrdqefegvllkagdmvmaptvvv
amddarnedplefrlgrkarqhstfgkgshtcpgahlarmemkvvlrewfaripefried
daplrysngivgsvkpfvlewpv