PDB entry 5kve
View 5kve on RCSB PDB site
Description: Zika specific antibody, ZV-48, bound to ZIKA envelope DIII
Class: viral protein/immune system
Keywords: Zika virus, envelope protein, viral protein, single-chain variable fragment, structural genomics, Center for Structural Genomics of Infectious Diseases, CSGID, VIRAL PROTEIN-IMMUNE SYSTEM complex
Deposited on
2016-07-14, released
2016-08-10
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-12-25, with a file datestamp of
2019-12-20.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'E':
Compound: Genome polyprotein
Species: Zika virus [TaxId:64320]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5kvee_ - Chain 'L':
Compound: ZV-48 Antibody scFv
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5kvel_ - Heterogens: NA, SO4, ACT, EDO, HOH
PDB Chain Sequences:
- Chain 'E':
Sequence, based on SEQRES records: (download)
>5kveE (E:)
mrlkgvsyslctaaftftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgr
litanpvitestenskmmleldppfgdsyivigvgekkithhwhrsgsti
Sequence, based on observed residues (ATOM records): (download)
>5kveE (E:)
vsyslctaaftftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgrlitan
pvitestenskmmleldppfgdsyivigvgekkithhwhrs
- Chain 'L':
Sequence, based on SEQRES records: (download)
>5kveL (L:)
mdivmsqspsslavsvgekitmsckssqsllysnneknylawyqqkpgqspklliywasa
rdsgvpdrftgsgsgtdftltissvkaedlavfycqqyysypytfgggtkleikggggsg
gggsggggsqvqlqqpgaellkpgasvklsckasgysfsnywmhwvkqrpgqgpewigmi
hpnsgntkynekfknkatltvdksssmvymqlssltsedsavfycarlgndmdywgqgts
vtvss
Sequence, based on observed residues (ATOM records): (download)
>5kveL (L:)
mdivmsqspsslavsvgekitmsckssqsllysnneknylawyqqkpgqspklliywasa
rdsgvpdrftgsgsgtdftltissvkaedlavfycqqyysypytfgggtkleikgqvqlq
qpgaellkpgasvklsckasgysfsnywmhwvkqrpgqgpewigmihpnsgntkynekfk
nkatltvdksssmvymqlssltsedsavfycarlgndmdywgqgtsvtvs