PDB entry 5ktl

View 5ktl on RCSB PDB site
Description: Dihydrodipicolinate synthase from the industrial and evolutionarily important cyanobacteria Anabaena variabilis.
Class: lyase
Keywords: DHDPS, enzyme, cyanobacteria, Diaminopimelate biosynthesis pathway, LYASE
Deposited on 2016-07-11, released 2016-11-30
The last revision prior to the SCOPe 2.06 freeze date was dated 2016-11-30, with a file datestamp of 2016-11-25.
Experiment type: XRAY
Resolution: 1.92 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 4-hydroxy-tetrahydrodipicolinate synthase
    Species: Anabaena variabilis [TaxId:240292]
    Gene: dapA, Ava_3607
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3M723 (37-329)
      • expression tag (35-36)
    Domains in SCOPe 2.06: d5ktla1, d5ktla2
  • Chain 'B':
    Compound: 4-hydroxy-tetrahydrodipicolinate synthase
    Species: Anabaena variabilis [TaxId:240292]
    Gene: dapA, Ava_3607
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3M723 (37-329)
      • expression tag (35-36)
    Domains in SCOPe 2.06: d5ktlb1, d5ktlb2
  • Heterogens: MN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5ktlA (A:)
mrgshhhhhhgmasmtggqqmgrdlyddddkdrwgsvgdfgtvltamitpfkadgsvnya
vaaelaahlvdngtdtlvvcgttgesptlswdeeynlfvevlqtvagkakviagcgsnst
keaiaatqkaakigvhgtlqvvpyynkppqaglyqhfqaiaqacpdlplllynvpgrtgq
nlspetvvrlaeidniigvxeasgnldqageirrstpkefqiyagddsltlpllaigakg
vvsvashlvgnqlqqmiqafnsgqvtvasdihlrllplfkalfittnpipikqalklqgw
evgstrpplsdadaevsqkleavmkhlnli

    Sequence, based on observed residues (ATOM records): (download) 
    >5ktlA (A:)
svgdfgtvltamitpfkadgsvnyavaaelaahlvdngtdtlvvcgttgesptlswdeey
nlfvevlqtvagkakviagcgsnstkeaiaatqkaakigvhgtlqvvpyynkppqaglyq
hfqaiaqacpdlplllynvpgrtgqnlspetvvrlaeidniigvxeasgnldqageirrs
tpkefqiyagddsltlpllaigakgvvsvashlvgnqlqqmiqafnsgqvtvasdihlrl
lplfkalfittnpipikqalklqgwevgstrpplsdadaevsqkleavmkhlnli

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5ktlB (B:)
mrgshhhhhhgmasmtggqqmgrdlyddddkdrwgsvgdfgtvltamitpfkadgsvnya
vaaelaahlvdngtdtlvvcgttgesptlswdeeynlfvevlqtvagkakviagcgsnst
keaiaatqkaakigvhgtlqvvpyynkppqaglyqhfqaiaqacpdlplllynvpgrtgq
nlspetvvrlaeidniigvxeasgnldqageirrstpkefqiyagddsltlpllaigakg
vvsvashlvgnqlqqmiqafnsgqvtvasdihlrllplfkalfittnpipikqalklqgw
evgstrpplsdadaevsqkleavmkhlnli

    Sequence, based on observed residues (ATOM records): (download) 
    >5ktlB (B:)
svgdfgtvltamitpfkadgsvnyavaaelaahlvdngtdtlvvcgttgesptlswdeey
nlfvevlqtvagkakviagcgsnstkeaiaatqkaakigvhgtlqvvpyynkppqaglyq
hfqaiaqacpdlplllynvpgrtgqnlspetvvrlaeidniigvxeasgnldqageirrs
tpkefqiyagddsltlpllaigakgvvsvashlvgnqlqqmiqafnsgqvtvasdihlrl
lplfkalfittnpipikqalklqgwevgstrpplsdadaevsqkleavmkhlnli