PDB entry 5kth

View 5kth on RCSB PDB site
Description: Structure of cow mincle complexed with brartemicin
Class: sugar binding protein
Keywords: glycobiology, carbohydrate-binding protein, C-type lectin, complex, SUGAR BINDING PROTEIN
Deposited on 2016-07-11, released 2016-08-31
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.21 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: mincle protein
    Species: Bos taurus [TaxId:9913]
    Gene: CLEC4E
    Database cross-references and differences (RAF-indexed):
    • Uniprot E1BHM0 (1-145)
      • expression tag (0)
      • see remark 999 (111)
      • expression tag (146-147)
    Domains in SCOPe 2.08: d5ktha1, d5ktha2, d5ktha3
  • Heterogens: 6X7, CA, PGE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5kthA (A:)
    aelscyndgsgsvknccplkwfhfqsscylfspdtmswraslkncssmgahlvvintqee
    qeflyytkprkkefyigltdqvtegqwqwvdgtpftkslsfwdagepnnlvtvedcatir
    dssnprqnwndvpcffnmfrvcemperki
    

    Sequence, based on observed residues (ATOM records): (download)
    >5kthA (A:)
    aelscysvknccplkwfhfqsscylfspdtmswraslkncssmgahlvvintqeeqefly
    ytkprkkefyigltdqvtegqwqwvdgtpftkslsfwdagepnnlvtvedcatirdssnp
    rqnwndvpcffnmfrvcemperk