PDB entry 5kkb
View 5kkb on RCSB PDB site
Description: Structure of mouse Golgi alpha-1,2-mannosidase IA and Man9GlcNAc2-PA complex
Class: sugar binding protein
Keywords: Alpha/alpha barrel, Golgi apparatus, deglycosylation, glycan substrate analog, SUGAR BINDING PROTEIN
Deposited on
2016-06-21, released
2016-12-07
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-04.
Experiment type: XRAY
Resolution: 1.77 Å
R-factor: N/A
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA
Species: Mus musculus [TaxId:10090]
Gene: Man1a1, Man1a
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5kkba_ - Chain 'B':
Compound: Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA
Species: Mus musculus [TaxId:10090]
Gene: Man1a1, Man1a
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5kkbb_ - Heterogens: NAG, LA, 1PS, BU1, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>5kkbA (A:)
vdflppvgvenrepadatirekrakikemmthawnnykryawglnelkpiskeghssslf
gnikgativdaldtlfimgmktefqeakswikkyldfnvnaevsvfevnirfvggllsay
ylsgeeifrkkavelgvkllpafhtpsgipwallnmksgigrnwpwasggssilaefgtl
hlefmhlshlsgdpvfaekvmkirtvlnkldkpeglypnylnpssgqwgqhhvsvgglgd
sfyeyllkawlmsdktdleakkmyfdavqaiethlirkssggltyiaewkggllehkmgh
ltcfaggmfalgadgapearaqhylelgaeiartchesynrtyvklgpeafrfdggveai
atrqnekyyilrpevietymymwrlthdpkyrtwaweavealeshcrvnggysglrdvyi
aresyddvqqsfflaetlkylylifsdddllplehwifnteahpfpilr
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>5kkbB (B:)
vdflppvgvenrepadatirekrakikemmthawnnykryawglnelkpiskeghssslf
gnikgativdaldtlfimgmktefqeakswikkyldfnvnaevsvfevnirfvggllsay
ylsgeeifrkkavelgvkllpafhtpsgipwallnmksgigrnwpwasggssilaefgtl
hlefmhlshlsgdpvfaekvmkirtvlnkldkpeglypnylnpssgqwgqhhvsvgglgd
sfyeyllkawlmsdktdleakkmyfdavqaiethlirkssggltyiaewkggllehkmgh
ltcfaggmfalgadgapearaqhylelgaeiartchesynrtyvklgpeafrfdggveai
atrqnekyyilrpevietymymwrlthdpkyrtwaweavealeshcrvnggysglrdvyi
aresyddvqqsfflaetlkylylifsdddllplehwifnteahpfpilr