PDB entry 5kba

View 5kba on RCSB PDB site
Description: computational design of self-assembling cyclic protein homooligomers
Deposited on 2016-06-02, released 2017-04-12
The last revision was dated 2017-11-01, with a file datestamp of 2017-10-27.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Designed protein ANK1C2
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 5KBA (Start-168)
  • Chain 'B':
    Compound: Designed protein ANK1C2
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 5KBA (Start-168)
  • Chain 'C':
    Compound: Designed protein ANK1C2
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 5KBA (Start-168)
  • Chain 'D':
    Compound: Designed protein ANK1C2
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 5KBA (Start-168)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.07, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >5kbaA (A:)
    mhhhhhhgswgsselgkrlieaaengnkdrvkdliengadvnasdsdgrtplhhaaengh
    aevvalliekgadvnakdsdgrtplhhaaenghdevvlilllkgadvnakdsdgrtplhh
    aaenghkrvvlvlilagadvntsdsdgrtpldlarehgneevvkalekq
    

    Sequence, based on observed residues (ATOM records):
    >5kbaA (A:)
    sselgkrlieaaengnkdrvkdliengadvnasdsdgrtplhhaaenghaevvalliekg
    advnakdsdgrtplhhaaenghdevvlilllkgadvnakdsdgrtplhhaaenghkrvvl
    vlilagadvntsdsdgrtpldlarehgneevvkalekq
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >5kbaB (B:)
    mhhhhhhgswgsselgkrlieaaengnkdrvkdliengadvnasdsdgrtplhhaaengh
    aevvalliekgadvnakdsdgrtplhhaaenghdevvlilllkgadvnakdsdgrtplhh
    aaenghkrvvlvlilagadvntsdsdgrtpldlarehgneevvkalekq
    

    Sequence, based on observed residues (ATOM records):
    >5kbaB (B:)
    wgsselgkrlieaaengnkdrvkdliengadvnasdsdgrtplhhaaenghaevvallie
    kgadvnakdsdgrtplhhaaenghdevvlilllkgadvnakdsdgrtplhhaaenghkrv
    vlvlilagadvntsdsdgrtpldlarehgneevvkalekq
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >5kbaC (C:)
    mhhhhhhgswgsselgkrlieaaengnkdrvkdliengadvnasdsdgrtplhhaaengh
    aevvalliekgadvnakdsdgrtplhhaaenghdevvlilllkgadvnakdsdgrtplhh
    aaenghkrvvlvlilagadvntsdsdgrtpldlarehgneevvkalekq
    

    Sequence, based on observed residues (ATOM records):
    >5kbaC (C:)
    sselgkrlieaaengnkdrvkdliengadvnasdsdgrtplhhaaenghaevvalliekg
    advnakdsdgrtplhhaaenghdevvlilllkgadvnakdsdgrtplhhaaenghkrvvl
    vlilagadvntsdsdgrtpldlarehgneevvkalekq
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >5kbaD (D:)
    mhhhhhhgswgsselgkrlieaaengnkdrvkdliengadvnasdsdgrtplhhaaengh
    aevvalliekgadvnakdsdgrtplhhaaenghdevvlilllkgadvnakdsdgrtplhh
    aaenghkrvvlvlilagadvntsdsdgrtpldlarehgneevvkalekq
    

    Sequence, based on observed residues (ATOM records):
    >5kbaD (D:)
    selgkrlieaaengnkdrvkdliengadvnasdsdgrtplhhaaenghaevvalliekga
    dvnakdsdgrtplhhaaenghdevvlilllkgadvnakdsdgrtplhhaaenghkrvvlv
    lilagadvntsdsdgrtpldlarehgneevvkalekq