PDB entry 5k4f

View 5k4f on RCSB PDB site
Description: cal pdz mutant c319a with a peptide
Deposited on 2016-05-20, released 2017-08-09
The last revision was dated 2019-12-25, with a file datestamp of 2019-12-20.
Experiment type: XRAY
Resolution: 1.36 Å
R-factor: N/A
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Golgi-associated PDZ and coiled-coil motif-containing protein
    Species: Homo sapiens [TaxId:9606]
    Gene: GOPC, CAL, FIG
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9HD26 (0-86)
      • engineered mutation (43)
  • Chain 'B':
    Compound: Golgi-associated PDZ and coiled-coil motif-containing protein
    Species: Homo sapiens [TaxId:9606]
    Gene: GOPC, CAL, FIG
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9HD26 (0-86)
      • engineered mutation (43)
  • Chain 'C':
    Compound: HPV18E6 Peptide
    Species: Human papillomavirus type 18, synthetic [TaxId:333761]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: HPV18E6 Peptide
    Species: Human papillomavirus type 18, synthetic [TaxId:333761]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >5k4fA (A:)
    gpirkvlllkedheglgisitggkehgvpiliseihpgqpadragglhvgdailavngvn
    lrdtkhkeavtilsqqrgeiefevvyv
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >5k4fB (B:)
    gpirkvlllkedheglgisitggkehgvpiliseihpgqpadragglhvgdailavngvn
    lrdtkhkeavtilsqqrgeiefevvyv
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >5k4fC (C:)
    rlqrrretqv
    

    Sequence, based on observed residues (ATOM records):
    >5k4fC (C:)
    rretqv
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >5k4fD (D:)
    rlqrrretqv
    

    Sequence, based on observed residues (ATOM records):
    >5k4fD (D:)
    etqv