PDB entry 5k48

View 5k48 on RCSB PDB site
Description: VIM-2 Metallo Beta Lactamase in complex with 3-(mercaptomethyl)-[1,1'-biphenyl]-4-carboxylic acid
Class: hydrolase
Keywords: metallo beta-lactamase, antibiotic resistance, carbapenamase. inhibitor, hydrolase
Deposited on 2016-05-20, released 2017-06-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-02-21, with a file datestamp of 2018-02-16.
Experiment type: XRAY
Resolution: 1.74 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: beta-lactamase vim-2
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: blaVIM-2, bla vim-2, bla-VIM-2, blasVIM-2, blaVIM2, blm, VIM-2, vim-2, PAERUG_P32_London_17_VIM_2_10_11_06255
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5k48a_
  • Chain 'B':
    Compound: beta-lactamase vim-2
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: blaVIM-2, bla vim-2, bla-VIM-2, blasVIM-2, blaVIM2, blm, VIM-2, vim-2, PAERUG_P32_London_17_VIM_2_10_11_06255
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5k48b_
  • Heterogens: S5Z, FMT, ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5k48A (A:)
gpvdssgeyptvseipvgevrlyqiadgvwshiatqsfdgavypsnglivrdgdelllid
tawgakntaallaeiekqiglpvtravsthfhddrvggvdvlraagvatyaspstrrlae
vegneipthsleglsssgdavrfgpvelfypgaahstdnlvvyvpsasvlyggcaiyels
rtsagnvadadlaewptsieriqqhypeaqfvipghglpggldllkhttnvvkahtnrsv
ve

    Sequence, based on observed residues (ATOM records): (download) 
    >5k48A (A:)
eyptvseipvgevrlyqiadgvwshiatqsfdgavypsnglivrdgdelllidtawgakn
taallaeiekqiglpvtravsthfhddrvggvdvlraagvatyaspstrrlaevegneip
thsleglsssgdavrfgpvelfypgaahstdnlvvyvpsasvlyggcaiyelsrtsagnv
adadlaewptsieriqqhypeaqfvipghglpggldllkhttnvvkahtnr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5k48B (B:)
gpvdssgeyptvseipvgevrlyqiadgvwshiatqsfdgavypsnglivrdgdelllid
tawgakntaallaeiekqiglpvtravsthfhddrvggvdvlraagvatyaspstrrlae
vegneipthsleglsssgdavrfgpvelfypgaahstdnlvvyvpsasvlyggcaiyels
rtsagnvadadlaewptsieriqqhypeaqfvipghglpggldllkhttnvvkahtnrsv
ve

    Sequence, based on observed residues (ATOM records): (download) 
    >5k48B (B:)
eyptvseipvgevrlyqiadgvwshiatqsfdgavypsnglivrdgdelllidtawgakn
taallaeiekqiglpvtravsthfhddrvggvdvlraagvatyaspstrrlaevegneip
thsleglsssgdavrfgpvelfypgaahstdnlvvyvpsasvlyggcaiyelsrtsagnv
adadlaewptsieriqqhypeaqfvipghglpggldllkhttnvvkahtnrs