PDB entry 5jpa

View 5jpa on RCSB PDB site
Description: Hexameric HIV-1 CA H12Y mutant
Class: viral protein
Keywords: Capsid, Viral Protein
Deposited on 2016-05-03, released 2016-08-10
The last revision prior to the SCOPe 2.06 freeze date was dated 2016-08-10, with a file datestamp of 2016-08-05.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: capsid protein p24
    Species: Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE) [TaxId:11698]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12493 (0-End)
      • engineered mutation (11)
      • engineered mutation (13)
      • engineered mutation (44)
    Domains in SCOPe 2.06: d5jpaa1, d5jpaa2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5jpaA (A:)
pivqnlqgqmvyqcisprtlnawvkvveekafspevipmfsalscgatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknaatetllvqnanpdcktilkalgpgatleemmtacqgvggpghkarvl

    Sequence, based on observed residues (ATOM records): (download) 
    >5jpaA (A:)
pivqnlqgqmvyqcisprtlnawvkvveekafspevipmfsalscgatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpviapgqmreprgsdiagttstlqeqigwmthnppi
pvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqastetllv
qnanpdcktilkalgpgatleemmtacq