PDB entry 5jp5

View 5jp5 on RCSB PDB site
Description: Crystal structure of rat Galectin 5
Class: sugar binding protein
Keywords: lectin carbohydrate recognition jellyroll topology, SUGAR BINDING PROTEIN
Deposited on 2016-05-03, released 2017-05-24
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-05-24, with a file datestamp of 2017-05-19.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Galectin-5
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Lgals5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5jp5a_
  • Chain 'B':
    Compound: Galectin-5
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Lgals5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5jp5b_
  • Chain 'C':
    Compound: Galectin-5
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Lgals5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5jp5c_
  • Chain 'D':
    Compound: Galectin-5
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Lgals5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5jp5d_
  • Chain 'E':
    Compound: Galectin-5
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Lgals5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5jp5e_
  • Chain 'F':
    Compound: Galectin-5
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Lgals5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5jp5f_
  • Heterogens: PEG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5jp5A (A:)
mssfstqtpypnlavpfftsipnglypsksivisgvvlsdakrfqinlrcggdiafhlnp
rfdenavvrntqinnswgpeerslpgsmpfsrgqrfsvwilceghcfkvavdgqhiceys
hrlmnlpdintlevagdiqlthvet

    Sequence, based on observed residues (ATOM records): (download) 
    >5jp5A (A:)
nlavpfftsipnglypsksivisgvvlsdakrfqinlrcggdiafhlnprfdenavvrnt
qinnswgpeerslpgsmpfsrgqrfsvwilceghcfkvavdgqhiceyshrlmnlpdint
levagdiqlthvet

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5jp5B (B:)
mssfstqtpypnlavpfftsipnglypsksivisgvvlsdakrfqinlrcggdiafhlnp
rfdenavvrntqinnswgpeerslpgsmpfsrgqrfsvwilceghcfkvavdgqhiceys
hrlmnlpdintlevagdiqlthvet

    Sequence, based on observed residues (ATOM records): (download) 
    >5jp5B (B:)
nlavpfftsipnglypsksivisgvvlsdakrfqinlrcggdiafhlnprfdenavvrnt
qinnswgpeerslpgsmpfsrgqrfsvwilceghcfkvavdgqhiceyshrlmnlpdint
levagdiqlthvet

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5jp5C (C:)
mssfstqtpypnlavpfftsipnglypsksivisgvvlsdakrfqinlrcggdiafhlnp
rfdenavvrntqinnswgpeerslpgsmpfsrgqrfsvwilceghcfkvavdgqhiceys
hrlmnlpdintlevagdiqlthvet

    Sequence, based on observed residues (ATOM records): (download) 
    >5jp5C (C:)
nlavpfftsipnglypsksivisgvvlsdakrfqinlrcggdiafhlnprfdenavvrnt
qinnswgpeerslpgsmpfsrgqrfsvwilceghcfkvavdgqhiceyshrlmnlpdint
levagdiqlthvet

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5jp5D (D:)
mssfstqtpypnlavpfftsipnglypsksivisgvvlsdakrfqinlrcggdiafhlnp
rfdenavvrntqinnswgpeerslpgsmpfsrgqrfsvwilceghcfkvavdgqhiceys
hrlmnlpdintlevagdiqlthvet

    Sequence, based on observed residues (ATOM records): (download) 
    >5jp5D (D:)
ssfstqtpypnlavpfftsipnglypsksivisgvvlsdakrfqinlrcggdiafhlnpr
fdenavvrntqinnswgpeerslpgsmpfsrgqrfsvwilceghcfkvavdgqhiceysh
rlmnlpdintlevagdiqlthvet

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5jp5E (E:)
mssfstqtpypnlavpfftsipnglypsksivisgvvlsdakrfqinlrcggdiafhlnp
rfdenavvrntqinnswgpeerslpgsmpfsrgqrfsvwilceghcfkvavdgqhiceys
hrlmnlpdintlevagdiqlthvet

    Sequence, based on observed residues (ATOM records): (download) 
    >5jp5E (E:)
ssfstqtpypnlavpfftsipnglypsksivisgvvlsdakrfqinlrcggdiafhlnpr
fdenavvrntqinnswgpeerslpgsmpfsrgqrfsvwilceghcfkvavdgqhiceysh
rlmnlpdintlevagdiqlthvet

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5jp5F (F:)
mssfstqtpypnlavpfftsipnglypsksivisgvvlsdakrfqinlrcggdiafhlnp
rfdenavvrntqinnswgpeerslpgsmpfsrgqrfsvwilceghcfkvavdgqhiceys
hrlmnlpdintlevagdiqlthvet

    Sequence, based on observed residues (ATOM records): (download) 
    >5jp5F (F:)
ssfstqtpypnlavpfftsipnglypsksivisgvvlsdakrfqinlrcggdiafhlnpr
fdenavvrntqinnswgpeerslpgsmpfsrgqrfsvwilceghcfkvavdgqhiceysh
rlmnlpdintlevagdiqlthvet