PDB entry 5jo7

View 5jo7 on RCSB PDB site
Description: Henbane premnaspirodiene synthase (HPS), also known as Henbane vetispiradiene synthase (HVS) from Hyoscyamus muticus
Class: lyase
Keywords: terpene synthase, HPS, Hyoscyamus, LYASE
Deposited on 2016-05-02, released 2017-05-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-05-03, with a file datestamp of 2017-04-28.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Vetispiradiene synthase 1
    Species: Hyoscyamus muticus [TaxId:35626]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q39978 (Start-537)
      • conflict (363)
      • conflict (369)
    Domains in SCOPe 2.08: d5jo7a1, d5jo7a2
  • Chain 'B':
    Compound: Vetispiradiene synthase 1
    Species: Hyoscyamus muticus [TaxId:35626]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q39978 (Start-537)
      • conflict (363)
      • conflict (369)
    Domains in SCOPe 2.08: d5jo7b1, d5jo7b2
  • Chain 'C':
    Compound: Vetispiradiene synthase 1
    Species: Hyoscyamus muticus [TaxId:35626]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q39978 (Start-537)
      • conflict (363)
      • conflict (369)
    Domains in SCOPe 2.08: d5jo7c1, d5jo7c2
  • Chain 'D':
    Compound: Vetispiradiene synthase 1
    Species: Hyoscyamus muticus [TaxId:35626]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q39978 (Start-537)
      • conflict (363)
      • conflict (369)
    Domains in SCOPe 2.08: d5jo7d1, d5jo7d2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5jo7A (A:)
gshmaspslwgdrfhsfsvdnqvaekyaqeietlkeqtstmlsaacgttlteklnlidii
erlgiayhfekqiedmldhiyradpyfeaheyndlntssvqfrllrqhgynvspnifsrf
qdangkfkeslrsdirgllnlyeashvrthkedileealvfsvghlesaaphlksplskq
vthaleqslhksiprveiryfisiyeeeefkndlllrfakldynllqmlhkhelsevsrw
wkdldfvttlpyardravecyfwtmgvyaepqysqarvmlaktiamisivddtfdaygiv
kelevytdaiqrwdisqidrlpeymkisykalldlyddyekelskdgrsdvvhyakermk
eivrnyfieakwfiegympsvseylsnalatstyylltttsylgmksatkehfewlatnp
kileanatlcrvvddiatyevekgrgqiatgiecymrdygvstevamekfqemadiawkd
vneeilrptpvsseiltrilnlariidvtykhnqdgythpekvlkphiialvvdsidi

    Sequence, based on observed residues (ATOM records): (download) 
    >5jo7A (A:)
dnqvaekyaqeietlkeqtstmlsaacgttlteklnlidiierlgiayhfekqiedmldh
iyradpyfeaheyndlntssvqfrllrqhgynvspnifsrfqdangkfkeslrsdirgll
nlyeashvrthkedileealvfsvghlesaaphlksplskqvthaleqslhksiprveir
yfisiyeeeefkndlllrfakldynllqmlhkhelsevsrwwkdldfvttlpyardrave
cyfwtmgvyaepqysqarvmlaktiamisivddtfdaygivkelevytdaiqrwdisqid
rlpeymkisykalldlyddyekelskdgrsdvvhyakermkeivrnyfieakwfiegymp
svseylsnalatstyylltttsylgmksatkehfewlatnpkileanatlcrvvddiaty
evekgrgqiatgiecymrdygvstevamekfqemadiawkdvneeilrptpvsseiltri
lnlariidvtykekvlkphiialvvdsidi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5jo7B (B:)
gshmaspslwgdrfhsfsvdnqvaekyaqeietlkeqtstmlsaacgttlteklnlidii
erlgiayhfekqiedmldhiyradpyfeaheyndlntssvqfrllrqhgynvspnifsrf
qdangkfkeslrsdirgllnlyeashvrthkedileealvfsvghlesaaphlksplskq
vthaleqslhksiprveiryfisiyeeeefkndlllrfakldynllqmlhkhelsevsrw
wkdldfvttlpyardravecyfwtmgvyaepqysqarvmlaktiamisivddtfdaygiv
kelevytdaiqrwdisqidrlpeymkisykalldlyddyekelskdgrsdvvhyakermk
eivrnyfieakwfiegympsvseylsnalatstyylltttsylgmksatkehfewlatnp
kileanatlcrvvddiatyevekgrgqiatgiecymrdygvstevamekfqemadiawkd
vneeilrptpvsseiltrilnlariidvtykhnqdgythpekvlkphiialvvdsidi

    Sequence, based on observed residues (ATOM records): (download) 
    >5jo7B (B:)
nqvaekyaqeietlkeqtstmlsaacgttlteklnlidiierlgiayhfekqiedmldhi
yradpyfeaheyndlntssvqfrllrqhgynvspnifsrfqdangkfkeslrsdirglln
lyeashvrthkedileealvfsvghlesaaphlksplskqvthaleqslhksiprveiry
fisiyeeeefkndlllrfakldynllqmlhkhelsevsrwwkdldfvttlpyardravec
yfwtmgvyaepqysqarvmlaktiamisivddtfdaygivkelevytdaiqrwdisqidr
lpeymkisykalldlyddyekelskdgrsdvvhyakermkeivrnyfieakwfiegymps
vseylsnalatstyylltttsylgmksatkehfewlatnpkileanatlcrvvddiatye
vqiatgiecymrdygvstevamekfqemadiawkdvneeilrptpvsseiltrilnlari
idvtykhpekvlkphiialvvdsidi

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5jo7C (C:)
gshmaspslwgdrfhsfsvdnqvaekyaqeietlkeqtstmlsaacgttlteklnlidii
erlgiayhfekqiedmldhiyradpyfeaheyndlntssvqfrllrqhgynvspnifsrf
qdangkfkeslrsdirgllnlyeashvrthkedileealvfsvghlesaaphlksplskq
vthaleqslhksiprveiryfisiyeeeefkndlllrfakldynllqmlhkhelsevsrw
wkdldfvttlpyardravecyfwtmgvyaepqysqarvmlaktiamisivddtfdaygiv
kelevytdaiqrwdisqidrlpeymkisykalldlyddyekelskdgrsdvvhyakermk
eivrnyfieakwfiegympsvseylsnalatstyylltttsylgmksatkehfewlatnp
kileanatlcrvvddiatyevekgrgqiatgiecymrdygvstevamekfqemadiawkd
vneeilrptpvsseiltrilnlariidvtykhnqdgythpekvlkphiialvvdsidi

    Sequence, based on observed residues (ATOM records): (download) 
    >5jo7C (C:)
qvaekyaqeietlkeqtstmlsaacgttlteklnlidiierlgiayhfekqiedmldhiy
radpyfeaheyndlntssvqfrllrqhgynvspnifsrfqdangkfkeslrsdirgllnl
yeashvrthkedileealvfsvghlesaaphlksplskqvthaleqslhksiprveiryf
isiyeeeefkndlllrfakldynllqmlhkhelsevsrwwkdldfvttlpyardravecy
fwtmgvyaepqysqarvmlaktiamisivddtfdaygivkelevytdaiqrwdisqidrl
peymkisykalldlyddyekelskdgrsdvvhyakermkeivrnyfieakwfiegympsv
seylsnalatstyylltttsylgmksatkehfewlatnpkileanatlcrvvddiatyev
eatgiecymrdygvstevamekfqemadiawkdvneeilrptpvsseiltrilnlariid
vtykpekvlkphiialvvdsidi

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5jo7D (D:)
gshmaspslwgdrfhsfsvdnqvaekyaqeietlkeqtstmlsaacgttlteklnlidii
erlgiayhfekqiedmldhiyradpyfeaheyndlntssvqfrllrqhgynvspnifsrf
qdangkfkeslrsdirgllnlyeashvrthkedileealvfsvghlesaaphlksplskq
vthaleqslhksiprveiryfisiyeeeefkndlllrfakldynllqmlhkhelsevsrw
wkdldfvttlpyardravecyfwtmgvyaepqysqarvmlaktiamisivddtfdaygiv
kelevytdaiqrwdisqidrlpeymkisykalldlyddyekelskdgrsdvvhyakermk
eivrnyfieakwfiegympsvseylsnalatstyylltttsylgmksatkehfewlatnp
kileanatlcrvvddiatyevekgrgqiatgiecymrdygvstevamekfqemadiawkd
vneeilrptpvsseiltrilnlariidvtykhnqdgythpekvlkphiialvvdsidi

    Sequence, based on observed residues (ATOM records): (download) 
    >5jo7D (D:)
aqeietlkeqtstmlsaacgttlteklnlidiierlgiayhfekqiedmldhiyradpyf
eaheyndlntssvqfrllrqhgynvspnifsrfqdangkfkeslrsdirgllnlyeashv
rthkedileealvfsvghlesaaphlksplskqvthaleqslhksiprveiryfisiyee
eefkndlllrfakldynllqmlhkhelsevsrwwkdldfvttlpyardravecyfwtmgv
yaepqysqarvmlaktiamisivddtfdaygivkelevytdaiqrwdisqidrlpeymki
sykalldlyddyekelskdgrsdvvhyakermkeivrnyfieakwfiegympsvseylsn
alatstyylltttsylgmksatkehfewlatnpkileanatlcrvvddiatyevekgiat
giecymrdygvstevamekfqemadiawkdvneeilrptpvsseiltrilnlariidvty
kekvlkphiialvvdsidi