PDB entry 5jjn

View 5jjn on RCSB PDB site
Description: Structure of the SRII/HtrII(G83F) Complex in P212121 space group ("V" shape)
Class: signaling protein
Keywords: sensory rhodopsin II, transducer, membrane protein complex, signaling protein
Deposited on 2016-04-24, released 2017-02-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Sensory rhodopsin-2
    Species: NATRONOMONAS PHARAONIS [TaxId:2257]
    Gene: sop2, sopII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5jjna_
  • Chain 'B':
    Compound: sensory rhodopsin II transducer
    Species: NATRONOMONAS PHARAONIS [TaxId:2257]
    Gene: htr2, htrII
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42259
      • engineered mutation (79)
  • Chain 'C':
    Compound: Sensory rhodopsin-2
    Species: NATRONOMONAS PHARAONIS [TaxId:2257]
    Gene: sop2, sopII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5jjnc_
  • Chain 'D':
    Compound: sensory rhodopsin II transducer
    Species: NATRONOMONAS PHARAONIS [TaxId:2257]
    Gene: htr2, htrII
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42259
      • engineered mutation (79)
  • Heterogens: LFA, BOG, RET, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5jjnA (A:)
vglttlfwlgaigmlvgtlafawagrdagsgerryyvtlvgisgiaavayvvmalgvgwv
pvaertvfapryidwilttplivyflgllagldsrefgivitlntvvmlagfagamvpgi
eryalfgmgavaflglvyylvgpmtesasqrssgikslyvrlrnltvilwaiypfiwllg
ppgvalltptvdvalivyldlvtkvgfgfialdaaatlraehgeslagvdtdapavaden
shhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5jjnA (A:)
glttlfwlgaigmlvgtlafawagrdagsgerryyvtlvgisgiaavayvvmalgvgwvp
vaertvfapryidwilttplivyflgllagldsrefgivitlntvvmlagfagamvpgie
ryalfgmgavaflglvyylvgpmtesasqrssgikslyvrlrnltvilwaiypfiwllgp
pgvalltptvdvalivyldlvtkvgfgfialdaaatlraehge

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5jjnC (C:)
vglttlfwlgaigmlvgtlafawagrdagsgerryyvtlvgisgiaavayvvmalgvgwv
pvaertvfapryidwilttplivyflgllagldsrefgivitlntvvmlagfagamvpgi
eryalfgmgavaflglvyylvgpmtesasqrssgikslyvrlrnltvilwaiypfiwllg
ppgvalltptvdvalivyldlvtkvgfgfialdaaatlraehgeslagvdtdapavaden
shhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5jjnC (C:)
glttlfwlgaigmlvgtlafawagrdagsgerryyvtlvgisgiaavayvvmalgvgwvp
vaertvfapryidwilttplivyflgllagldsrefgivitlntvvmlagfagamvpgie
ryalfgmgavaflglvyylvgpmtesasqrssgikslyvrlrnltvilwaiypfiwllgp
pgvalltptvdvalivyldlvtkvgfgfialdaaa

  • Chain 'D':
    No sequence available.