PDB entry 5jg6

View 5jg6 on RCSB PDB site
Description: APC11-Ubv shows role of noncovalent RING-Ubiquitin interactions in processive multiubiquitination and Ubiquitin chain elongation by APC/C
Class: cell cycle
Keywords: RING Ubiquitin Cell Cycle Anaphase-promoting complex-Cyclosome, CELL CYCLE
Deposited on 2016-04-19, released 2016-06-15
The last revision prior to the SCOPe 2.06 freeze date was dated 2016-06-15, with a file datestamp of 2016-06-10.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Anaphase-promoting complex subunit 11
  Species: Homo sapiens [TaxId:9606]
  Gene: ANAPC11, HSPC214
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9NYG5 (Start-69)
• Chain 'B':
  Compound: Polyubiquitin-B
  Species: Homo sapiens [TaxId:9606]
  Gene: UBB
  Database cross-references and differences (RAF-indexed):
  • Uniprot P0CG47 (5-End)
    • expression tag (4)
    • conflict (9)
    • conflict (13-14)
    • conflict (47)
    • conflict (49)
    • conflict (52)
    • conflict (54)
    • conflict (69)
    • conflict (71)
    • conflict (73)
    • conflict (75-76)
    • conflict (78-79)
  Domains in SCOPe 2.06: d5jg6b1, d5jg6b2
• Chain 'C':
  Compound: Polyubiquitin-B
  Species: Homo sapiens [TaxId:9606]
  Gene: UBB
  Database cross-references and differences (RAF-indexed):
  • Uniprot P0CG47
    • conflict (9)
    • conflict (13-14)
    • conflict (47)
    • conflict (49)
    • conflict (52)
    • conflict (54)
    • conflict (69)
    • conflict (71)
    • conflict (73)
    • conflict (75-76)
    • conflict (78-79)
  Domains in SCOPe 2.06: d5jg6c_
• Chain 'D':
  Compound: Anaphase-promoting complex subunit 11
  Species: Homo sapiens [TaxId:9606]
  Gene: ANAPC11, HSPC214
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9NYG5 (Start-69)
• Heterogens: ZN, HOH

PDB Chain Sequences:

• Chain 'A':
  No sequence available.
  
  
• Chain 'B':
  Sequence, based on SEQRES records: (download)
  

  >5jg6B (B:)
  gsggsgmqilvktprgktitlevepsdtienvkakiqdkegippdqqilffavkrledgr
  tlsdyniqkksslllamrvpgkmk
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >5jg6B (B:)
  sgmqilvktprgktitlevepsdtienvkakiqdkegippdqqilffavkrledgrtlsd
  yniqkksslllamrvpg
  

  
  
• Chain 'C':
  Sequence, based on SEQRES records: (download)
  

  >5jg6C (C:)
  gsggsgmqilvktprgktitlevepsdtienvkakiqdkegippdqqilffavkrledgr
  tlsdyniqkksslllamrvpgkmk
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >5jg6C (C:)
  mqilvktprgktitlevepsdtienvkakiqdkegippdqqilffavkrledgrtlsdyn
  iqkksslllamrvpg
  

  
  
• Chain 'D':
  No sequence available.