PDB entry 5jdc

View 5jdc on RCSB PDB site
Description: Trypanosoma brucei PTR1 in complex with inhibitor NP-13 (Hesperetin)
Class: oxidoreductase
Keywords: Trypanosoma brucei, pteridine reductase, oxydoreductase, inhibitor, OXIDOREDUCTASE
Deposited on 2016-04-16, released 2016-08-17
The last revision prior to the SCOPe 2.06 freeze date was dated 2016-08-17, with a file datestamp of 2016-08-12.
Experiment type: XRAY
Resolution: 1.78 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: pteridine reductase
    Species: Trypanosoma brucei brucei [TaxId:5702]
    Gene: PTR1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5jdca_
  • Chain 'B':
    Compound: pteridine reductase
    Species: Trypanosoma brucei brucei [TaxId:5702]
    Gene: PTR1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5jdcb_
  • Chain 'C':
    Compound: pteridine reductase
    Species: Trypanosoma brucei brucei [TaxId:5702]
    Gene: PTR1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5jdcc_
  • Chain 'D':
    Compound: pteridine reductase
    Species: Trypanosoma brucei brucei [TaxId:5702]
    Gene: PTR1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5jdcd_
  • Heterogens: NAP, 6JP, ACT, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5jdcA (A:)
mgsshhhhhhssglvprgshmeapaavvtgaakrigraiavklhqtgyrvvihyhnsaea
avsladelnkersntavvcqadltnsnvlpasceeiinscfrafgrcdvlvnnasafypt
plvqgdhednsngktvetqvaeligtnaiapflltmsfaqrqkgtnpnctssnlsivnlc
damvdqpcmafslynmgkhalvgltqsaalelapygirvngvapgvsllpvamgeeekdk
wrrkvplgrreasaeqiadaviflvsgsaqyitgsiikvdgglslvha

    Sequence, based on observed residues (ATOM records): (download) 
    >5jdcA (A:)
eapaavvtgaakrigraiavklhqtgyrvvihyhnsaeaavsladelnkersntavvcqa
dltnsnvlpasceeiinscfrafgrcdvlvnnasafyptplvgktvetqvaeligtnaia
pflltmsfaqrqsnlsivnlcdamvdqpcmafslynmgkhalvgltqsaalelapygirv
ngvapgvsllpvamgeeekdkwrrkvplgrreasaeqiadaviflvsgsaqyitgsiikv
dgglslvha

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5jdcB (B:)
mgsshhhhhhssglvprgshmeapaavvtgaakrigraiavklhqtgyrvvihyhnsaea
avsladelnkersntavvcqadltnsnvlpasceeiinscfrafgrcdvlvnnasafypt
plvqgdhednsngktvetqvaeligtnaiapflltmsfaqrqkgtnpnctssnlsivnlc
damvdqpcmafslynmgkhalvgltqsaalelapygirvngvapgvsllpvamgeeekdk
wrrkvplgrreasaeqiadaviflvsgsaqyitgsiikvdgglslvha

    Sequence, based on observed residues (ATOM records): (download) 
    >5jdcB (B:)
eapaavvtgaakrigraiavklhqtgyrvvihyhnsaeaavsladelnkersntavvcqa
dltnsnvlpasceeiinscfrafgrcdvlvnnasafyptplvktvetqvaeligtnaiap
flltmsfaqrqnlsivnlcdamvdqpcmafslynmgkhalvgltqsaalelapygirvng
vapgvsllpamgeeekdkwrrkvplgrreasaeqiadaviflvsgsaqyitgsiikvdgg
lslvha

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5jdcC (C:)
mgsshhhhhhssglvprgshmeapaavvtgaakrigraiavklhqtgyrvvihyhnsaea
avsladelnkersntavvcqadltnsnvlpasceeiinscfrafgrcdvlvnnasafypt
plvqgdhednsngktvetqvaeligtnaiapflltmsfaqrqkgtnpnctssnlsivnlc
damvdqpcmafslynmgkhalvgltqsaalelapygirvngvapgvsllpvamgeeekdk
wrrkvplgrreasaeqiadaviflvsgsaqyitgsiikvdgglslvha

    Sequence, based on observed residues (ATOM records): (download) 
    >5jdcC (C:)
eapaavvtgaakrigraiavklhqtgyrvvihyhnsaeaavsladelnkersntavvcqa
dltnsnvlpasceeiinscfrafgrcdvlvnnasafyptplvktvetqvaeligtnaiap
flltmsfaqrqnlsivnlcdamvdqpcmafslynmgkhalvgltqsaalelapygirvng
vapgvslpeekdkwrrkvplgrrsaeqiadaviflvsgsaqyitgsiikvdgglslvha

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5jdcD (D:)
mgsshhhhhhssglvprgshmeapaavvtgaakrigraiavklhqtgyrvvihyhnsaea
avsladelnkersntavvcqadltnsnvlpasceeiinscfrafgrcdvlvnnasafypt
plvqgdhednsngktvetqvaeligtnaiapflltmsfaqrqkgtnpnctssnlsivnlc
damvdqpcmafslynmgkhalvgltqsaalelapygirvngvapgvsllpvamgeeekdk
wrrkvplgrreasaeqiadaviflvsgsaqyitgsiikvdgglslvha

    Sequence, based on observed residues (ATOM records): (download) 
    >5jdcD (D:)
eapaavvtgaakrigraiavklhqtgyrvvihyhnsaeaavsladelnkersntavvcqa
dltnsnvlpasceeiinscfrafgrcdvlvnnasafyptplvktvetqvaeligtnaiap
flltmsfaqrqsnlsivnlcdamvdqpcmafslynmgkhalvgltqsaalelapygirvn
gvapgvsllpvamgeeekdkwrrkvplgrreasaeqiadaviflvsgsaqyitgsiikvd
gglslvha