PDB entry 5jbx
View 5jbx on RCSB PDB site
Description: Crystal structure of LiuC in complex with coenzyme A and malonic acid
Class: lyase
Keywords: Dehydratase, isovalerate, Myxococcus xanthus, lyase
Deposited on
2016-04-14, released
2016-06-22
The last revision prior to the SCOPe 2.08 freeze date was dated
2016-09-14, with a file datestamp of
2016-09-09.
Experiment type: XRAY
Resolution: 1.1 Å
R-factor: N/A
AEROSPACI score: 0.73
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 3-hydroxybutyryl-CoA dehydratase
Species: Myxococcus xanthus (strain DK 1622) [TaxId:246197]
Gene: crt, MXAN_3757
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5jbxa_ - Chain 'B':
Compound: 3-hydroxybutyryl-CoA dehydratase
Species: Myxococcus xanthus (strain DK 1622) [TaxId:246197]
Gene: crt, MXAN_3757
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5jbxb1, d5jbxb2 - Chain 'C':
Compound: 3-hydroxybutyryl-CoA dehydratase
Species: Myxococcus xanthus (strain DK 1622) [TaxId:246197]
Gene: crt, MXAN_3757
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5jbxc1, d5jbxc2 - Heterogens: COA, MLI, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5jbxA (A:)
gphmpefkvdargpieiwtidgesrrnaisramlkelgelvtrvsssrdvravvitgagd
kafcagadlkeratmaedevrafldglrrtfraieksdcvfiaaingaalgggtelalac
dlrvaapaaelgltevklgiipggggtqrlarlvgpgrakdliltarrinaaeafsvgla
nrlapeghllavayglaesvvenapiavatakhaidegtglelddalalelrkyeeilkt
edrleglrafaekrapvykgr
Sequence, based on observed residues (ATOM records): (download)
>5jbxA (A:)
mpefkvdargpieiwtidgesrrnaisramlkelgelvtrvsssrdvravvitgagdkaf
cagadlkeratmaedevrafldglrrtfraieksdcvfiaaingaalgggtelalacdlr
vaapaaelgltevklgiipggggtqrlarlvgpgrakdliltarrinaaeafsvglanrl
apeghllavayglaesvvenapiavatakhaidegtglelddalalelrkyeeilktedr
leglrafaekrapvykgr
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>5jbxB (B:)
gphmpefkvdargpieiwtidgesrrnaisramlkelgelvtrvsssrdvravvitgagd
kafcagadlkeratmaedevrafldglrrtfraieksdcvfiaaingaalgggtelalac
dlrvaapaaelgltevklgiipggggtqrlarlvgpgrakdliltarrinaaeafsvgla
nrlapeghllavayglaesvvenapiavatakhaidegtglelddalalelrkyeeilkt
edrleglrafaekrapvykgr
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>5jbxC (C:)
gphmpefkvdargpieiwtidgesrrnaisramlkelgelvtrvsssrdvravvitgagd
kafcagadlkeratmaedevrafldglrrtfraieksdcvfiaaingaalgggtelalac
dlrvaapaaelgltevklgiipggggtqrlarlvgpgrakdliltarrinaaeafsvgla
nrlapeghllavayglaesvvenapiavatakhaidegtglelddalalelrkyeeilkt
edrleglrafaekrapvykgr