PDB entry 5j9w
View 5j9w on RCSB PDB site
Description: Crystal structure of the NuA4 core complex
Class: transferase
Keywords: NuA4, nucleosome, histone, acetylation, TRANSFERASE
Deposited on
2016-04-11, released
2016-10-26
The last revision prior to the SCOPe 2.08 freeze date was dated
2016-10-26, with a file datestamp of
2016-10-21.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.18
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Histone acetyltransferase ESA1
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: ESA1, YOR244W, O5257
Database cross-references and differences (RAF-indexed):
- Uniprot Q08649
- engineered mutation (197)
Domains in SCOPe 2.08: d5j9wa_ - Chain 'B':
Compound: Chromatin modification-related protein EAF6
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: EAF6, YJR082C, J1854
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Enhancer of polycomb-like protein 1
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: EPL1, YFL024C
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: Chromatin modification-related protein YNG2
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: YNG2, EAF4, NBN1, YHR090C
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: Histone acetyltransferase ESA1
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: ESA1, YOR244W, O5257
Database cross-references and differences (RAF-indexed):
- Uniprot Q08649
- engineered mutation (197)
Domains in SCOPe 2.08: d5j9we_ - Chain 'F':
Compound: Chromatin modification-related protein EAF6
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: EAF6, YJR082C, J1854
Database cross-references and differences (RAF-indexed):
- Chain 'G':
Compound: Enhancer of polycomb-like protein 1
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: EPL1, YFL024C
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: Chromatin modification-related protein YNG2
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: YNG2, EAF4, NBN1, YHR090C
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: Histone acetyltransferase ESA1
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: ESA1, YOR244W, O5257
Database cross-references and differences (RAF-indexed):
- Uniprot Q08649
- engineered mutation (197)
Domains in SCOPe 2.08: d5j9wi_ - Chain 'J':
Compound: Chromatin modification-related protein EAF6
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: EAF6, YJR082C, J1854
Database cross-references and differences (RAF-indexed):
- Chain 'K':
Compound: Enhancer of polycomb-like protein 1
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: EPL1, YFL024C
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: Chromatin modification-related protein YNG2
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: YNG2, EAF4, NBN1, YHR090C
Database cross-references and differences (RAF-indexed):
- Heterogens: ACO
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5j9wA (A:)
hedeikklrtsgsmtqnphevarvrnlnriimgkyeiepwyfspypieltdedfiyiddf
tlqyfgskkqyeryrkkctlrhppgneiyrddyvsffeidgrkqrtwcrnlcllsklfld
hktlyydvdpflfycmtrrdelghhlvgyfskekesadgynvaciltlpqyqrmgygkll
iefsyelskkenkvgspqkplsdlgllsyraywsdtlitllvehqkeitideissmtsmt
ttdilhtaktlnilryykgqhiiflnedildrynrlkakkrrtidpnrliwkppvftasq
lrfaw
Sequence, based on observed residues (ATOM records): (download)
>5j9wA (A:)
evarvrnlnriimgkyeiepwyfspypieltdedfiyiddftlqyfgskkqyeryrkkct
lrhppgneiyrddyvsffeidgrkqrtwcrnlcllsklfldhktlyydvdpflfycmtrr
delghhlvgyfskekesadgynvaciltlpqyqrmgygklliefsyelskkenkvgspqk
plsdlgllsyraywsdtlitllvehqkeitideissmtsmtttdilhtaktlnilryykg
qhiiflnedildrynrlkakkrrtidpnrliwkppvft
- Chain 'B':
No sequence available.
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence, based on SEQRES records: (download)
>5j9wE (E:)
hedeikklrtsgsmtqnphevarvrnlnriimgkyeiepwyfspypieltdedfiyiddf
tlqyfgskkqyeryrkkctlrhppgneiyrddyvsffeidgrkqrtwcrnlcllsklfld
hktlyydvdpflfycmtrrdelghhlvgyfskekesadgynvaciltlpqyqrmgygkll
iefsyelskkenkvgspqkplsdlgllsyraywsdtlitllvehqkeitideissmtsmt
ttdilhtaktlnilryykgqhiiflnedildrynrlkakkrrtidpnrliwkppvftasq
lrfaw
Sequence, based on observed residues (ATOM records): (download)
>5j9wE (E:)
evarvrnlnriimgkyeiepwyfspypieltdedfiyiddftlqyfgskkqyeryrkkct
lrhppgneiyrddyvsffeidgrkqrtwcrnlcllsklfldhktlyydvdpflfycmtrr
delghhlvgyfskekesadgynvaciltlpqyqrmgygklliefsyelskkenkvgspqk
plsdlgllsyraywsdtlitllvehqkeitideissmtsmtttdilhtaktlnilryykg
qhiiflnedildrynrlkakkrrtidpnrliwkppvft
- Chain 'F':
No sequence available.
- Chain 'G':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'I':
Sequence, based on SEQRES records: (download)
>5j9wI (I:)
hedeikklrtsgsmtqnphevarvrnlnriimgkyeiepwyfspypieltdedfiyiddf
tlqyfgskkqyeryrkkctlrhppgneiyrddyvsffeidgrkqrtwcrnlcllsklfld
hktlyydvdpflfycmtrrdelghhlvgyfskekesadgynvaciltlpqyqrmgygkll
iefsyelskkenkvgspqkplsdlgllsyraywsdtlitllvehqkeitideissmtsmt
ttdilhtaktlnilryykgqhiiflnedildrynrlkakkrrtidpnrliwkppvftasq
lrfaw
Sequence, based on observed residues (ATOM records): (download)
>5j9wI (I:)
evarvrnlnriimgkyeiepwyfspypieltdedfiyiddftlqyfgskkqyeryrkkct
lrhppgneiyrddyvsffeidgrkqrtwcrnlcllsklfldhktlyydvdpflfycmtrr
delghhlvgyfskekesadgynvaciltlpqyqrmgygklliefsyelskkenkvgspqk
plsdlgllsyraywsdtlitllvehqkeitideissmtsmtttdilhtaktlnilryykg
qhiiflnedildrynrlkakkrrtidpnrliwkppvft
- Chain 'J':
No sequence available.
- Chain 'K':
No sequence available.
- Chain 'L':
No sequence available.