PDB entry 5j8x

View 5j8x on RCSB PDB site
Description: crystal structure of e. coli pbp5 with 2c
Class: hydrolase
Keywords: antibiotic resistance, penicillin binding protein, boronic acid, hydrolase
Deposited on 2016-04-08, released 2016-08-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-09-28, with a file datestamp of 2016-09-23.
Experiment type: XRAY
Resolution: 2.53 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: D-alanyl-D-alanine carboxypeptidase dacA
    Species: Escherichia coli [TaxId:83333]
    Gene: dacA, pfv, b0632, JW0627
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5j8xa1, d5j8xa2
  • Heterogens: OK3, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5j8xA (A:)
mgsshhhhhhssglvprgshmasddlniktmipgvpqidaesyilidynsgkvlaeqnad
vrrdpasltkmmtsyvigqamkagkfketdlvtigndawatgnpvfkgsslmflkpgmqv
pvsqlirginlqsgndacvamadfaagsqdafvglmnsyvnalglknthfqtvhgldadg
qyssardmaligqalirdvpneysiykekeftfngirqlnrngllwdnslnvdgiktght
dkagynlvasategqmrlisavmggrtfkgreaeskklltwgfrffetvnplkvgkefas
epvwfgdsdraslgvdkdvyltiprgrmkdlkasyvlnsselhaplqknqvvgtinfqld
gktieqrplvvlqeipegnffgkiidc

    Sequence, based on observed residues (ATOM records): (download) 
    >5j8xA (A:)
niktmipgvpqidaesyilidynsgkvlaeqnadvrrdpasltkmmtsyvigqamkagkf
ketdlvtignmflkpgmqvpvsqlirginlqsgndacvamadfaagsqdafvglmnsyvn
alglknthfqtvhgldadgqyssardmaligqalirdvpneysiykekeftfngirqlnr
ngllwdnslnvdgiktghtdkagynlvasategqmrlisavmggrtfkgreaeskklltw
gfrffetvnplkvgkefasepvwfgdsdraslgvdkdvyltiprgrmkdlkasyvlnsse
lhaplqknqvvgtinfqldgktieqrplvvlqeipegnff