SCOPe 2.07: Structural Classification of Proteins

PDB entry 5izd

View 5izd on RCSB PDB site
Description: Wild-type glyceraldehyde dehydrogenase from Thermoplasma acidophilum in complex with NADP
Class: oxidoreductase
Keywords: oxidoreductase, NADP-dependent dehydrogenase
Deposited on 2016-03-25, released 2017-04-05
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-09-06, with a file datestamp of 2017-09-01.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: D-glyceraldehyde dehydrogenase (NADP(+))
Species: Thermoplasma acidophilum [TaxId:2303]
Gene: Ta0809
Database cross-references and differences (RAF-indexed):
- Uniprot Q9HK01 (0-492)
  - expression tag (493)
Domains in SCOPe 2.07: d5izda1, d5izda2
Chain 'B':
Compound: D-glyceraldehyde dehydrogenase (NADP(+))
Species: Thermoplasma acidophilum [TaxId:2303]
Gene: Ta0809
Database cross-references and differences (RAF-indexed):
- Uniprot Q9HK01 (0-End)
Domains in SCOPe 2.07: d5izdb_
Chain 'C':
Compound: D-glyceraldehyde dehydrogenase (NADP(+))
Species: Thermoplasma acidophilum [TaxId:2303]
Gene: Ta0809
Database cross-references and differences (RAF-indexed):
- Uniprot Q9HK01 (0-End)
Domains in SCOPe 2.07: d5izdc_
Chain 'D':
Compound: D-glyceraldehyde dehydrogenase (NADP(+))
Species: Thermoplasma acidophilum [TaxId:2303]
Gene: Ta0809
Database cross-references and differences (RAF-indexed):
- Uniprot Q9HK01 (0-End)
Domains in SCOPe 2.07: d5izdd_
Chain 'E':
Compound: D-glyceraldehyde dehydrogenase (NADP(+))
Species: Thermoplasma acidophilum [TaxId:2303]
Gene: Ta0809
Database cross-references and differences (RAF-indexed):
- Uniprot Q9HK01 (0-End)
Domains in SCOPe 2.07: d5izde_
Chain 'F':
Compound: D-glyceraldehyde dehydrogenase (NADP(+))
Species: Thermoplasma acidophilum [TaxId:2303]
Gene: Ta0809
Database cross-references and differences (RAF-indexed):
- Uniprot Q9HK01 (0-End)
Domains in SCOPe 2.07: d5izdf_
Chain 'G':
Compound: D-glyceraldehyde dehydrogenase (NADP(+))
Species: Thermoplasma acidophilum [TaxId:2303]
Gene: Ta0809
Database cross-references and differences (RAF-indexed):
- Uniprot Q9HK01 (0-End)
Domains in SCOPe 2.07: d5izdg_
Chain 'H':
Compound: D-glyceraldehyde dehydrogenase (NADP(+))
Species: Thermoplasma acidophilum [TaxId:2303]
Gene: Ta0809
Database cross-references and differences (RAF-indexed):
- Uniprot Q9HK01 (0-End)
Domains in SCOPe 2.07: d5izdh_
Heterogens: NAP, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>5izdA (A:)
mdtklyidgqwvnsssgktvdkyspvtgqvigrfeaatrddvdraidaaedafwawndlg
sverskiiyrakelieknraeleniimeengkpvkeakeevdgvidqiqyyaewarklng
evvegtsshrkifqykvpygivvaltpwnfpagmvarklapalltgntvvlkpssdtpgs
aewivrkfveagvpkgvlnfitgrgseigdyivehkkvnlitmtgstatgqrimqkasan
maklilelggkapfmvwkdadmdnalktllwakywnagqsciaaerlyvhediydtfmsr
fvelsrklalgdpknadmgplinkgalqatseiveeakesgakilfggsqpslsgpyrng
yfflptiignadqkskifqeeifapvigarkissveemydlandskyglasylftkdpni
ifeaserirfgelyvnmpgpeasqgyhtgfrmtgqagegskygiseylklkniyvdysgk
plhintvrddlfqsgrpvlgsshhhhhh