PDB entry 5irw
View 5irw on RCSB PDB site
Description: Crystal structure of avidin in complex with 1-desthiobiotinylpyrene
Class: biotin binding protein
Keywords: complex, biotin binding protein
Deposited on
2016-03-14, released
2016-10-12
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-06-29.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Avidin
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5irwa_ - Chain 'B':
Compound: Avidin
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5irwb_ - Chain 'C':
Compound: Avidin
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5irwc_ - Chain 'D':
Compound: Avidin
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5irwd_ - Heterogens: NAG, D9P, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5irwA (A:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyttavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke
Sequence, based on observed residues (ATOM records): (download)
>5irwA (A:)
kcsltgkwtndlgsnmtigavnsrgeftgtyttavtatsneikesplhgtqntinkrtqp
tfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginiftr
l
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5irwB (B:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyttavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke
Sequence, based on observed residues (ATOM records): (download)
>5irwB (B:)
kcsltgkwtndlgsnmtigavnsrgeftgtyttavtatsneikesplhgtqntinkrtqp
tfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginiftr
l
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5irwC (C:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyttavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke
Sequence, based on observed residues (ATOM records): (download)
>5irwC (C:)
kcsltgkwtndlgsnmtigavnsrgeftgtyttavtatsneikesplhgtqntinkrtqp
tfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginiftr
l
- Chain 'D':
Sequence, based on SEQRES records: (download)
>5irwD (D:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyttavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke
Sequence, based on observed residues (ATOM records): (download)
>5irwD (D:)
kcsltgkwtndlgsnmtigavnsrgeftgtyttavtatsneikesplhgtqntinkrtqp
tfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginiftr
l