PDB entry 5im0

View 5im0 on RCSB PDB site
Description: Crystal structure of the RNA recognition motif of mRNA decay regulator AUF1
Class: RNA binding protein
Keywords: mRNA decay, hnRNP D0, AUF1, RNA recognition motif, crystallization, RNA BINDING PROTEIN
Deposited on 2016-03-05, released 2016-08-03
The last revision prior to the SCOPe 2.06 freeze date was dated 2016-08-03, with a file datestamp of 2016-07-29.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: heterogeneous nuclear ribonucleoprotein D0
  Species: Homo sapiens [TaxId:9606]
  Gene: HNRNPD, AUF1, HNRPD
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q14103
    • conflict (6)
  Domains in SCOPe 2.06: d5im0a_
• Chain 'B':
  Compound: heterogeneous nuclear ribonucleoprotein D0
  Species: Homo sapiens [TaxId:9606]
  Gene: HNRNPD, AUF1, HNRPD
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q14103 (1-80)
    • expression tag (0)
    • expression tag (81)
  Domains in SCOPe 2.06: d5im0b1, d5im0b2, d5im0b3
• Heterogens: HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >5im0A (A:)
  mskneemegkmfigglswdttkkdlkdyfskfgevvdctlkldpitgrsrgfgfvlfkes
  esvdkvmdqkehklngkvidpkrakam
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >5im0A (A:)
  megkmfigglswdttkkdlkdyfskfgevvdctlkldpitgrsrgfgfvlfkesesvdkv
  mdqkehklngkvidpkrak
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5im0B (B:)
  megkmfigglswdttkkdlkdyfskfgevvdctlkldpitgrsrgfgfvlfkesesvdkv
  mdqkehklngkvidpkrakama