PDB entry 5ilo

View 5ilo on RCSB PDB site
Description: Crystal structure of photoreceptor dehydrogenase from Drosophila melanogaster
Class: oxidoreductase
Keywords: short-chain dehydrogenase, OXIDOREDUCTASE
Deposited on 2016-03-04, released 2016-11-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-04-25, with a file datestamp of 2018-04-20.
Experiment type: XRAY
Resolution: 2.71 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Photoreceptor dehydrogenase, isoform C
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Pdh, pcdr, CG4899, Dmel_CG4899
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7KNR7 (11-270)
      • expression tag (6-10)
    Domains in SCOPe 2.08: d5iloa1, d5iloa2
  • Chain 'B':
    Compound: Photoreceptor dehydrogenase, isoform C
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Pdh, pcdr, CG4899, Dmel_CG4899
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7KNR7 (11-End)
      • expression tag (6-10)
    Domains in SCOPe 2.08: d5ilob1, d5ilob2
  • Heterogens: NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5iloA (A:)
mahhhhhhvgtsfrgknavvtggaggiglqvskqllaagaakvaiidlqdnleefvklra
ahptqsvmiikmdvankkgveatyeeiaktfgnidivvnvagifndkdvqrtllvnlggi
instlsalpymgkdnggkggivvnmssvvgldpmfiipvygatkagiinftrclanekyy
qrsgikfvtvcpgatmtdmftnftekiifpetsdetyrildrlnkqsaadvsrcilnvle
kdkngavyviegkrvypleikpqwtgkeqal

    Sequence, based on observed residues (ATOM records): (download) 
    >5iloA (A:)
hhvgtsfrgknavvtggaggiglqvskqllaagaakvaiidlqdnleefvklraahptqs
vmiikmdvankkgveatyeeiaktfgnidivvnvagifndkdvqrtllvnlggiinstls
alpymgkdnggkggivvnmssvvgldpmfiipvygatkagiinftrclanekyyqrsgik
fvtvcpgatmtdmftnftekiifpetslnkqsaadvsrcilnvlekdkngavyviegkrv
ypleikpqwtgkeqal

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5iloB (B:)
mahhhhhhvgtsfrgknavvtggaggiglqvskqllaagaakvaiidlqdnleefvklra
ahptqsvmiikmdvankkgveatyeeiaktfgnidivvnvagifndkdvqrtllvnlggi
instlsalpymgkdnggkggivvnmssvvgldpmfiipvygatkagiinftrclanekyy
qrsgikfvtvcpgatmtdmftnftekiifpetsdetyrildrlnkqsaadvsrcilnvle
kdkngavyviegkrvypleikpqwtgkeqal

    Sequence, based on observed residues (ATOM records): (download) 
    >5iloB (B:)
hhvgtsfrgknavvtggaggiglqvskqllaagaakvaiidlqdnleefvklraahptqs
vmiikmdvankkgveatyeeiaktfgnidivvnvagifndkdvqrtllvnlggiinstls
alpymgkdnggkggivvnmssvvgldpmfiipvygatkagiinftrclanekyyqrsgik
fvtvcpgatmtdmftnftekiifpetsdetyrildrlnkqsaadvsrcilnvlekdknga
vyviegkrvypleikpqwtgkeqa