PDB entry 5idx

View 5idx on RCSB PDB site
Description: Crystal structure of an oxidoreductase from Burkholderia vietnamiensis
Class: oxidoreductase
Keywords: SSGCID, oxidoreductase, short chain dehydrogenase/reductase family, Burkholderia vietnamiensis, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease
Deposited on 2016-02-24, released 2016-03-16
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-03-16, with a file datestamp of 2016-03-11.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Short-chain dehydrogenase/reductase SDR
    Species: Burkholderia vietnamiensis (strain G4 / LMG 22486) [TaxId:269482]
    Gene: Bcep1808_2377
    Database cross-references and differences (RAF-indexed):
    • Uniprot A4JGH3 (8-266)
      • expression tag (6-7)
    Domains in SCOPe 2.07: d5idxa1, d5idxa2
  • Chain 'B':
    Compound: Short-chain dehydrogenase/reductase SDR
    Species: Burkholderia vietnamiensis (strain G4 / LMG 22486) [TaxId:269482]
    Gene: Bcep1808_2377
    Database cross-references and differences (RAF-indexed):
    • Uniprot A4JGH3 (8-266)
      • expression tag (4-7)
    Domains in SCOPe 2.07: d5idxb1, d5idxb2
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5idxA (A:)
mahhhhhhmdlgiagktalvcaaskglgrgcaealaaegvnlvivartrdtlertadeir
aasnvsvatvacdittpdgraaalaacpqpdilvnnaggpppgdfrdfshddwiralesn
mltpieliratvdgmiargfgrivnitssavkapidvlalsngarsgltgfvaglarkvv
gqgvtinnllpglfdtdriattlaaaanaqgvtvdelrarrtrdipagrlgtraefgaac
aflcsvhagyitgqnwlldggaypgtf

    Sequence, based on observed residues (ATOM records): (download) 
    >5idxA (A:)
hhmdlgiagktalvcaaskglgrgcaealaaegvnlvivartrdtlertadeiraasnvs
vatvacdittpdgraaalaacpqpdilvnnaggpppgdfrdfshddwiralesnmltpie
liratvdgmiargfgrivnitssavkapidvlalsngarsgltgfvaglarkvvgqgvti
nnllpglfdtdriattlaaaanaqgvtvdelrarrtrdipagrlgtraefgaacaflcsv
hagyitgqnwlldggaypgtf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5idxB (B:)
mahhhhhhmdlgiagktalvcaaskglgrgcaealaaegvnlvivartrdtlertadeir
aasnvsvatvacdittpdgraaalaacpqpdilvnnaggpppgdfrdfshddwiralesn
mltpieliratvdgmiargfgrivnitssavkapidvlalsngarsgltgfvaglarkvv
gqgvtinnllpglfdtdriattlaaaanaqgvtvdelrarrtrdipagrlgtraefgaac
aflcsvhagyitgqnwlldggaypgtf

    Sequence, based on observed residues (ATOM records): (download) 
    >5idxB (B:)
hhhhmdlgiagktalvcaaskglgrgcaealaaegvnlvivartrdtlertadeiraasn
vsvatvacdittpdgraaalaacpqpdilvnnaggpppgdfrdfshddwiralesnmltp
ieliratvdgmiargfgrivnitssavkapidvlalsngarsgltgfvaglarkvvgqgv
tinnllpglfdtdriattlaaaanaqgvtvdelrarrtrdipagrlgtraefgaacaflc
svhagyitgqnwlldggaypgtf