PDB entry 5i59
View 5i59 on RCSB PDB site
Description: Glutamate- and glycine-bound GluN1/GluN2A agonist binding domains with MPX 007
Class: transport protein, receptor
Keywords: NMDA receptor, Antagonist, TRANSPORT PROTEIN, RECEPTOR
Deposited on
2016-02-14, released
2016-09-21
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-12-25, with a file datestamp of
2019-12-20.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.25
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Glutamate receptor ionotropic, NMDA 1,Glutamate receptor ionotropic, NMDA 1
Species: Rattus norvegicus [TaxId:10116]
Gene: Grin1, Nmdar1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5i59a_ - Chain 'B':
Compound: Glutamate receptor ionotropic, NMDA 2A,Glutamate receptor ionotropic, NMDA 2A
Species: Rattus norvegicus [TaxId:10116]
Gene: Grin2a
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5i59b_ - Heterogens: GLY, GLU, 67Q, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5i59A (A:)
gmstrlkivtihqepfvyvkptmsdgtckeeftvngdpvkkvictgpndtspgsprhtvp
qccygfcidlliklartmnftyevhlvadgkfgtqervnnsnkkewngmmgellsgqadm
ivapltinneraqyiefskpfkyqgltilvkkgtritgindprlrnpsdkfiyatvkqss
vdiyfrrqvelstmyrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvt
tgelffrsgfgigmrkdspwkqnvslsilkshengfmedldktwvryqecds
Sequence, based on observed residues (ATOM records): (download)
>5i59A (A:)
trlkivtihqepfvyvkptmsdgtcvkkvictgphtvpqccygfcidlliklartmnfty
evhlvadgkfgtqervnsnkkewngmmgellsgqadmivapltinneraqyiefskpfky
qgltilvkkgtritgindprlrnpsdkfiyatvkqssvdiyfrrqvelstmyrhmekhny
esaaeaiqavrdnklhafiwdsavlefeasqkcdlvttgelffrsgfgigmrkdspwkqn
vslsilkshengfmedldktwv
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5i59B (B:)
sddnhlsivtleeapfvivedidpltetcvrntvpcrkfvkinnstnegmnvkkcckgfc
idilkklsrtvkftydlylvtngkhgkkvnnvwngmigevvyqravmavgsltineerse
vvdfsvpfvetgisvmvsrgtqvtglsdkkfqrphdysppfrfgtvpngsternirnnyp
ymhqymtrfnqrgvedalvslktgkldafiydaavlnykagrdegcklvtigsgyifatt
gygialqkgspwkrqidlallqfvgdgemeeletlwltgic
Sequence, based on observed residues (ATOM records): (download)
>5i59B (B:)
dnhlsivtleeapfvivedietcvrntvpcrkfvkinnstnegmnvkkcckgfcidilkk
lsrtvkftydlylvtngkhgkkvnnvwngmigevvyqravmavgsltineersevvdfsv
pfvetgisvmvsrgtqvtglsdkkfqrphdysppfrfgtvpngsternirnnypymhqym
trfnqrgvedalvslktgkldafiydaavlnykagrdegcklvtigsgyifattgygial
qkgspwkrqidlallqfvgdgemeeletlwltgic