PDB entry 5hoq

View 5hoq on RCSB PDB site
Description: Apo structure of CalS11, TDP-rhamnose 3'-o-methyltransferase, an enzyme in Calicheamicin biosynthesis
Class: transferase
Keywords: rhamnose methyltransferase Calicheamicin biosynthesis, TRANSFERASE
Deposited on 2016-01-19, released 2016-03-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-03-30, with a file datestamp of 2016-03-25.
Experiment type: XRAY
Resolution: 1.79 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TDP-rhamnose 3'-O-methyltransferase (CalS11)
    Species: Micromonospora echinospora [TaxId:1877]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hoqa_
  • Chain 'B':
    Compound: TDP-rhamnose 3'-O-methyltransferase (CalS11)
    Species: Micromonospora echinospora [TaxId:1877]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hoqb_
  • Chain 'C':
    Compound: TDP-rhamnose 3'-O-methyltransferase (CalS11)
    Species: Micromonospora echinospora [TaxId:1877]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hoqc_
  • Chain 'D':
    Compound: TDP-rhamnose 3'-O-methyltransferase (CalS11)
    Species: Micromonospora echinospora [TaxId:1877]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hoqd_
  • Chain 'E':
    Compound: TDP-rhamnose 3'-O-methyltransferase (CalS11)
    Species: Micromonospora echinospora [TaxId:1877]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hoqe_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5hoqA (A:)
mdsgdgqdlrafvhdspeetettqrltklltnspipteelvnnlplflrrhqmtdllsmd
alyrqvldvpgvimefgvrfgrhlgtfaalrgvyepynplrrivgfdtftgfpdvndvdr
vgptayqgrfavpggypaylkevldahecsdffghvtqrsvlvegdvretvprylaenpq
tvialayfdldlyeptkavleairpyltkgsivafdeldnpkwpgeniamrkvlgldhap
lrllpgrpapaylrwgd

    Sequence, based on observed residues (ATOM records): (download) 
    >5hoqA (A:)
qdlrafvhdspeetettqrltklltnspipteelvnnlplflrrhqmtdllsmdalyrqv
ldvpgvimefgvrfgrhlgtfaalrgvyepynplrrivgfdtftgrfavpggypaylkev
ldahecsdffghvtqrsvlvegdvretvprylaenpqtvialayfdldlyeptkavleai
rpyltkgsivafdeldnpkwpgeniamrkvlgldhaplrllpgrpapaylrwgd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5hoqB (B:)
mdsgdgqdlrafvhdspeetettqrltklltnspipteelvnnlplflrrhqmtdllsmd
alyrqvldvpgvimefgvrfgrhlgtfaalrgvyepynplrrivgfdtftgfpdvndvdr
vgptayqgrfavpggypaylkevldahecsdffghvtqrsvlvegdvretvprylaenpq
tvialayfdldlyeptkavleairpyltkgsivafdeldnpkwpgeniamrkvlgldhap
lrllpgrpapaylrwgd

    Sequence, based on observed residues (ATOM records): (download) 
    >5hoqB (B:)
qdlrafvhdspeetettqrltklltnspipteelvnnlplflrrhqmtdllsmdalyrqv
ldvpgvimefgvrfgrhlgtfaalrgvyepynplrrivgfdtftvpggypaylkevldah
ecsdffghvtqrsvlvegdvretvprylaenpqtvialayfdldlyeptkavleairpyl
tkgsivafdeldnpkwpgeniamrkvlgldhaplrllpgrpapaylrwgd

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5hoqC (C:)
mdsgdgqdlrafvhdspeetettqrltklltnspipteelvnnlplflrrhqmtdllsmd
alyrqvldvpgvimefgvrfgrhlgtfaalrgvyepynplrrivgfdtftgfpdvndvdr
vgptayqgrfavpggypaylkevldahecsdffghvtqrsvlvegdvretvprylaenpq
tvialayfdldlyeptkavleairpyltkgsivafdeldnpkwpgeniamrkvlgldhap
lrllpgrpapaylrwgd

    Sequence, based on observed residues (ATOM records): (download) 
    >5hoqC (C:)
qdlrafvhdspeetettqrltklltnspipteelvnnlplflrrhqmtdllsmdalyrqv
ldvpgvimefgvrfgrhlgtfaalrgvyepynplrrivgfdtftpggypaylkevldahe
csdffghvtqrsvlvegdvretvprylaenpqtvialayfdldlyeptkavleairpylt
kgsivafdeldnpkwpgeniamrkvlgldhaplrllpgrpapaylrwgd

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5hoqD (D:)
mdsgdgqdlrafvhdspeetettqrltklltnspipteelvnnlplflrrhqmtdllsmd
alyrqvldvpgvimefgvrfgrhlgtfaalrgvyepynplrrivgfdtftgfpdvndvdr
vgptayqgrfavpggypaylkevldahecsdffghvtqrsvlvegdvretvprylaenpq
tvialayfdldlyeptkavleairpyltkgsivafdeldnpkwpgeniamrkvlgldhap
lrllpgrpapaylrwgd

    Sequence, based on observed residues (ATOM records): (download) 
    >5hoqD (D:)
qdlrafvhdspeetettqrltklltnspipteelvnnlplflrrhqmtdllsmdalyrqv
ldvpgvimefgvrfgrhlgtfaalrgvyepynplrrivgfdtftvpggypaylkevldah
ecsdffghvtqrsvlvegdvretvprylaenpqtvialayfdldlyeptkavleairpyl
tkgsivafdeldnpkwpgeniamrkvlgldhaplrllpgrpapaylrwgd

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5hoqE (E:)
mdsgdgqdlrafvhdspeetettqrltklltnspipteelvnnlplflrrhqmtdllsmd
alyrqvldvpgvimefgvrfgrhlgtfaalrgvyepynplrrivgfdtftgfpdvndvdr
vgptayqgrfavpggypaylkevldahecsdffghvtqrsvlvegdvretvprylaenpq
tvialayfdldlyeptkavleairpyltkgsivafdeldnpkwpgeniamrkvlgldhap
lrllpgrpapaylrwgd

    Sequence, based on observed residues (ATOM records): (download) 
    >5hoqE (E:)
qdlrafvhdspeetettqrltklltnspipteelvnnlplflrrhqmtdllsmdalyrqv
ldvpgvimefgvrfgrhlgtfaalrgvyepynplrrivgfdtftqgrfavpggypaylke
vldahecsdffghvtqrsvlvegdvretvprylaenpqtvialayfdldlyeptkavlea
irpyltkgsivafdeldnpkwpgeniamrkvlgldhaplrllpgrpapaylrwgd