PDB entry 5hmm

View 5hmm on RCSB PDB site
Description: Crystal Structure of T5 D15 Protein Co-crystallized with Metal Ions
Class: hydrolase
Keywords: Metal ion complex, flap endonuclease, alternative conformations, hydrolase
Deposited on 2016-01-16, released 2016-06-01
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-07-20, with a file datestamp of 2016-07-15.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: exodeoxyribonuclease
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Gene: D15
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5hmma1, d5hmma2
  • Chain 'B':
    Compound: exodeoxyribonuclease
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Gene: D15
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5hmmb1, d5hmmb2
  • Heterogens: EDO, MG, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5hmmA (A:)
    rnlmivdgtnlgfrfkhnnskkpfassyvstiqslaksysarttivlgdkgksvfrlehl
    peykgnrdekyaqrteeekaldeqffeylkdafelckttfptftirgveaddmaayivkl
    ighlydhvwlistdgdwdtlltdkvsrfsfttrreyhlrdmyehhnvddveqfislkaim
    gdlgdnirgvegigakrgyniirefgnvldiidqlplpgkqkyiqnlnaseellfrnlil
    vdlptycvdaiaavgqdvldkftkdileiae
    

    Sequence, based on observed residues (ATOM records): (download)
    >5hmmA (A:)
    rnlmivdgtnlgfrfkkpfassyvstiqslaksysarttivlgdkgksvfrlehlpeykg
    nrdekyaqrteeekaldeqffeylkdafelckttfptftirgveaddmaayivklighly
    dhvwlistdgdwdtlltdkvsrfsfttrreyhlrdmyehhnvddveqfislkaimgdlgd
    nirgvegigakrgyniirefgnvldiidqlplpgkqkyiqnlnaseellfrnlilvdlpt
    ycvdaiaavgqdvldkftkdileiae
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5hmmB (B:)
    rnlmivdgtnlgfrfkhnnskkpfassyvstiqslaksysarttivlgdkgksvfrlehl
    peykgnrdekyaqrteeekaldeqffeylkdafelckttfptftirgveaddmaayivkl
    ighlydhvwlistdgdwdtlltdkvsrfsfttrreyhlrdmyehhnvddveqfislkaim
    gdlgdnirgvegigakrgyniirefgnvldiidqlplpgkqkyiqnlnaseellfrnlil
    vdlptycvdaiaavgqdvldkftkdileiae