PDB entry 5hmg
View 5hmg on RCSB PDB site
Description: refinement of the influenza virus hemagglutinin by simulated annealing
Class: Viral Protein
Keywords: influenza virus hemagglutinin
Deposited on
1989-09-11, released
1991-01-15
The last revision prior to the SCOP 1.75 freeze date was dated
2003-04-01, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: 0.22
AEROSPACI score: 0.23
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: hemagglutinin, ha1 chain
Species: Influenza virus
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d5hmga_ - Chain 'B':
Compound: hemagglutinin, ha1 chain
Species: Influenza virus
Domains in SCOP 1.75: d5hmgb_ - Chain 'C':
Compound: hemagglutinin, ha1 chain
Species: Influenza virus
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d5hmgc_ - Chain 'D':
Compound: hemagglutinin, ha1 chain
Species: Influenza virus
Domains in SCOP 1.75: d5hmgd_ - Chain 'E':
Compound: hemagglutinin, ha1 chain
Species: Influenza virus
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d5hmge_ - Chain 'F':
Compound: hemagglutinin, ha1 chain
Species: Influenza virus
Domains in SCOP 1.75: d5hmgf_ - Heterogens: SIA, NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>5hmgA (A:)
qdlpgndnstatlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrild
gidctlidallgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlef
itegftwtgvtqnggsnackrgpgsgffsrlnwltksgstypvlnvtmpnndnfdklyiw
gihhpstnqeqtslyvqasgrvtvstrrsqqtiipnigsrpwvrglssrisiywtivkpg
dvlvinsngnliaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnki
tygacpkyvkqntlklatgmrnvpekqt
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>5hmgB (B:)
glfgaiagfiengwegmidgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltgsemnklfe
ktrrqlrenaeemgngcfkiyhkcdnaciesirngtydhdvyrdealnnrfqikg
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>5hmgC (C:)
qdlpgndnstatlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrild
gidctlidallgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlef
itegftwtgvtqnggsnackrgpgsgffsrlnwltksgstypvlnvtmpnndnfdklyiw
gihhpstnqeqtslyvqasgrvtvstrrsqqtiipnigsrpwvrglssrisiywtivkpg
dvlvinsngnliaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnki
tygacpkyvkqntlklatgmrnvpekqt
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>5hmgD (D:)
glfgaiagfiengwegmidgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltgsemnklfe
ktrrqlrenaeemgngcfkiyhkcdnaciesirngtydhdvyrdealnnrfqikg
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>5hmgE (E:)
qdlpgndnstatlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrild
gidctlidallgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlef
itegftwtgvtqnggsnackrgpgsgffsrlnwltksgstypvlnvtmpnndnfdklyiw
gihhpstnqeqtslyvqasgrvtvstrrsqqtiipnigsrpwvrglssrisiywtivkpg
dvlvinsngnliaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnki
tygacpkyvkqntlklatgmrnvpekqt
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>5hmgF (F:)
glfgaiagfiengwegmidgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltgsemnklfe
ktrrqlrenaeemgngcfkiyhkcdnaciesirngtydhdvyrdealnnrfqikg