PDB entry 5hlm

View 5hlm on RCSB PDB site
Description: Crystal structure of avidin complex with a ferrocene biotin derivative
Class: biotin-binding protein
Keywords: glycoprotein, complex, biotin-binding protein
Deposited on 2016-01-15, released 2017-01-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Avidin
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hlma_
  • Chain 'B':
    Compound: Avidin
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hlmb_
  • Chain 'C':
    Compound: Avidin
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hlmc_
  • Chain 'D':
    Compound: Avidin
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hlmd_
  • Heterogens: B9F, NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5hlmA (A:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke

    Sequence, based on observed residues (ATOM records): (download) 
    >5hlmA (A:)
kcsltgkwtndlgsnmtigavnsrgeftgtyitavtneikesplhgtqnttqptfgftvn
wkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginiftrl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5hlmB (B:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke

    Sequence, based on observed residues (ATOM records): (download) 
    >5hlmB (B:)
kcsltgkwtndlgsnmtigavnsrgeftgtyitavikesplhgtqntqptfgftvnwkfs
esttvftgqcfidgkevlktmwllrssvndigddwkatrvginiftrl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5hlmC (C:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke

    Sequence, based on observed residues (ATOM records): (download) 
    >5hlmC (C:)
rkcsltgkwtndlgsnmtigavnsrgeftgtyitavneikesplhgtqntinkrtqptfg
ftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginiftrl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5hlmD (D:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke

    Sequence, based on observed residues (ATOM records): (download) 
    >5hlmD (D:)
kcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrtqp
tfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginiftr
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