PDB entry 5hlm
View 5hlm on RCSB PDB site
Description: Crystal structure of avidin complex with a ferrocene biotin derivative
Class: biotin-binding protein
Keywords: glycoprotein, complex, biotin-binding protein
Deposited on
2016-01-15, released
2017-01-18
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-06-29.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Avidin
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5hlma_ - Chain 'B':
Compound: Avidin
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5hlmb_ - Chain 'C':
Compound: Avidin
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5hlmc_ - Chain 'D':
Compound: Avidin
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5hlmd_ - Heterogens: B9F, NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5hlmA (A:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke
Sequence, based on observed residues (ATOM records): (download)
>5hlmA (A:)
kcsltgkwtndlgsnmtigavnsrgeftgtyitavtneikesplhgtqnttqptfgftvn
wkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginiftrl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5hlmB (B:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke
Sequence, based on observed residues (ATOM records): (download)
>5hlmB (B:)
kcsltgkwtndlgsnmtigavnsrgeftgtyitavikesplhgtqntqptfgftvnwkfs
esttvftgqcfidgkevlktmwllrssvndigddwkatrvginiftrl
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5hlmC (C:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke
Sequence, based on observed residues (ATOM records): (download)
>5hlmC (C:)
rkcsltgkwtndlgsnmtigavnsrgeftgtyitavneikesplhgtqntinkrtqptfg
ftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginiftrl
- Chain 'D':
Sequence, based on SEQRES records: (download)
>5hlmD (D:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke
Sequence, based on observed residues (ATOM records): (download)
>5hlmD (D:)
kcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrtqp
tfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginiftr
l