PDB entry 5hk8

View 5hk8 on RCSB PDB site
Description: Crystal structure of a methylesterase protein MES16 from Arabidopsis
Class: hydrolase
Keywords: methylesterase protein, MES16, hydrolase superfamily, HYDROLASE
Deposited on 2016-01-13, released 2016-05-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-09-09, with a file datestamp of 2020-09-04.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable pheophorbidase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: PPD, MES16, At4g16690, dl4370c, FCAALL.12
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hk8a_
  • Chain 'B':
    Compound: Probable pheophorbidase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: PPD, MES16, At4g16690, dl4370c, FCAALL.12
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hk8b_
  • Chain 'C':
    Compound: Probable pheophorbidase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: PPD, MES16, At4g16690, dl4370c, FCAALL.12
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hk8c_
  • Chain 'D':
    Compound: Probable pheophorbidase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: PPD, MES16, At4g16690, dl4370c, FCAALL.12
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hk8d_
  • Chain 'E':
    Compound: Probable pheophorbidase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: PPD, MES16, At4g16690, dl4370c, FCAALL.12
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hk8e_
  • Chain 'F':
    Compound: Probable pheophorbidase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: PPD, MES16, At4g16690, dl4370c, FCAALL.12
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hk8f_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5hk8A (A:)
mgsshhhhhhssglvprgshmasmtggqqmgrgsefmggeggaepvihfvfvhgashgaw
cwyklttlldaagfkstsvdltgagislidsnivfdsdqynrplfsllsdlpphhkvilv
ghsigggsvtealckftdkismaiylaasmvqpgsipsphlsnihvgeediweytygegt
dkpptgvlmkpefirhyyysqspledvtlsskllrpapmrafqdldklppnpeaekvprv
yiktakdnlfdsvrqdllvenwppsqlyvledsdhsaffsvpttlfayllravsflqr

    Sequence, based on observed residues (ATOM records): (download) 
    >5hk8A (A:)
vihfvfvhgashgawcwyklttlldaagfkstsvdltgagislidsnivfdsdqynrplf
sllsdlpphhkvilvghsigggsvtealckftdkismaiylaasmvqpgsiweytygegt
dkpptgvlmkpefirhyyysqspledvtlsskllrpapmrafqdldklppnpeaekvprv
yiktakdnlfdsvrqdllvenwppsqlyvledsdhsaffsvpttlfayllravsfl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5hk8B (B:)
mgsshhhhhhssglvprgshmasmtggqqmgrgsefmggeggaepvihfvfvhgashgaw
cwyklttlldaagfkstsvdltgagislidsnivfdsdqynrplfsllsdlpphhkvilv
ghsigggsvtealckftdkismaiylaasmvqpgsipsphlsnihvgeediweytygegt
dkpptgvlmkpefirhyyysqspledvtlsskllrpapmrafqdldklppnpeaekvprv
yiktakdnlfdsvrqdllvenwppsqlyvledsdhsaffsvpttlfayllravsflqr

    Sequence, based on observed residues (ATOM records): (download) 
    >5hk8B (B:)
vihfvfvhgashgawcwyklttlldaagfkstsvdltgagislidsnivfdsdqynrplf
sllsdlpphhkvilvghsigggsvtealckftdkismaiylaasmvqpgsiweytygegt
dkpptgvlmkpefirhyyysqspledvtlsskllrpapmrafqdldklppnpeaekvprv
yiktakdnlfdsvrqdllvenwppsqlyvledsdhsaffsvpttlfayllravsfl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5hk8C (C:)
mgsshhhhhhssglvprgshmasmtggqqmgrgsefmggeggaepvihfvfvhgashgaw
cwyklttlldaagfkstsvdltgagislidsnivfdsdqynrplfsllsdlpphhkvilv
ghsigggsvtealckftdkismaiylaasmvqpgsipsphlsnihvgeediweytygegt
dkpptgvlmkpefirhyyysqspledvtlsskllrpapmrafqdldklppnpeaekvprv
yiktakdnlfdsvrqdllvenwppsqlyvledsdhsaffsvpttlfayllravsflqr

    Sequence, based on observed residues (ATOM records): (download) 
    >5hk8C (C:)
vihfvfvhgashgawcwyklttlldaagfkstsvdltgagislidsnivfdsdqynrplf
sllsdlpphhkvilvghsigggsvtealckftdkismaiylaasmvqpgsiweytygegt
dkpptgvlmkpefirhyyysqspledvtlsskllrpapmrafqdldklppnpeaekvprv
yiktakdnlfdsvrqdllvenwppsqlyvledsdhsaffsvpttlfayllravsfl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5hk8D (D:)
mgsshhhhhhssglvprgshmasmtggqqmgrgsefmggeggaepvihfvfvhgashgaw
cwyklttlldaagfkstsvdltgagislidsnivfdsdqynrplfsllsdlpphhkvilv
ghsigggsvtealckftdkismaiylaasmvqpgsipsphlsnihvgeediweytygegt
dkpptgvlmkpefirhyyysqspledvtlsskllrpapmrafqdldklppnpeaekvprv
yiktakdnlfdsvrqdllvenwppsqlyvledsdhsaffsvpttlfayllravsflqr

    Sequence, based on observed residues (ATOM records): (download) 
    >5hk8D (D:)
vihfvfvhgashgawcwyklttlldaagfkstsvdltgagislidsnivfdsdqynrplf
sllsdlpphhkvilvghsigggsvtealckftdkismaiylaasmvqpgsiweytygegt
dkpptgvlmkpefirhyyysqspledvtlsskllrpapmrafqdldklppnpeaekvprv
yiktakdnlfdsvrqdllvenwppsqlyvledsdhsaffsvpttlfayllravsfl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5hk8E (E:)
mgsshhhhhhssglvprgshmasmtggqqmgrgsefmggeggaepvihfvfvhgashgaw
cwyklttlldaagfkstsvdltgagislidsnivfdsdqynrplfsllsdlpphhkvilv
ghsigggsvtealckftdkismaiylaasmvqpgsipsphlsnihvgeediweytygegt
dkpptgvlmkpefirhyyysqspledvtlsskllrpapmrafqdldklppnpeaekvprv
yiktakdnlfdsvrqdllvenwppsqlyvledsdhsaffsvpttlfayllravsflqr

    Sequence, based on observed residues (ATOM records): (download) 
    >5hk8E (E:)
vihfvfvhgashgawcwyklttlldaagfkstsvdltgagislidsnivfdsdqynrplf
sllsdlpphhkvilvghsigggsvtealckftdkismaiylaasmvqpgsiweytygegt
dkpptgvlmkpefirhyyysqspledvtlsskllrpapmrafqdldklppnpeaekvprv
yiktakdnlfdsvrqdllvenwppsqlyvledsdhsaffsvpttlfayllravsfl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5hk8F (F:)
mgsshhhhhhssglvprgshmasmtggqqmgrgsefmggeggaepvihfvfvhgashgaw
cwyklttlldaagfkstsvdltgagislidsnivfdsdqynrplfsllsdlpphhkvilv
ghsigggsvtealckftdkismaiylaasmvqpgsipsphlsnihvgeediweytygegt
dkpptgvlmkpefirhyyysqspledvtlsskllrpapmrafqdldklppnpeaekvprv
yiktakdnlfdsvrqdllvenwppsqlyvledsdhsaffsvpttlfayllravsflqr

    Sequence, based on observed residues (ATOM records): (download) 
    >5hk8F (F:)
vihfvfvhgashgawcwyklttlldaagfkstsvdltgagislidsnivfdsdqynrplf
sllsdlpphhkvilvghsigggsvtealckftdkismaiylaasmvqpgsiweytygegt
dkpptgvlmkpefirhyyysqspledvtlsskllrpapmrafqdldklppnpeaekvprv
yiktakdnlfdsvrqdllvenwppsqlyvledsdhsaffsvpttlfayllravsfl