PDB entry 5hek

View 5hek on RCSB PDB site
Description: crystal structure of M1.HpyAVI
Class: DNA binding protein
Keywords: M1.HpyAVI, DNA BINDING PROTEIN
Deposited on 2016-01-06, released 2016-11-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-11-30, with a file datestamp of 2016-11-25.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Adenine specific DNA methyltransferase (DpnA)
    Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
    Gene: HP_0050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5heka_
  • Chain 'B':
    Compound: Adenine specific DNA methyltransferase (DpnA)
    Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
    Gene: HP_0050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hekb_
  • Chain 'C':
    Compound: Adenine specific DNA methyltransferase (DpnA)
    Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
    Gene: HP_0050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hekc_
  • Chain 'D':
    Compound: Adenine specific DNA methyltransferase (DpnA)
    Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
    Gene: HP_0050
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5hekA (A:)
miqiyhadafeiikdfyqqnlkvdaiitdppynisvknnfptlksakrqgidfgewdknf
kllewiaryaplvnpngcmvifcsyrfisyiadfleengfvvkdfiqwvknnpmprnihr
ryvqdtefalwavkkkakwvfnkpknekylrplilkspvvsglektkhptqkslalmeki
isihtnpndivldpfmgsgttglacknlernfigiesekeyfqtakkrlnlflehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5hekA (A:)
miqiyhadafeiikdfyqqnlkvdaiitdppynknfkllewiaryaplvnpngcmvifcs
yrfisyiadfleengfvvkdfiqwvknnpmprnihrryvqdtefalwavkkkakwvfnkp
knekylrplilkspvqkslalmekiisihtnpndivldpfmgsgttglacknlernfigi
esekeyfqtakkrlnlf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5hekB (B:)
miqiyhadafeiikdfyqqnlkvdaiitdppynisvknnfptlksakrqgidfgewdknf
kllewiaryaplvnpngcmvifcsyrfisyiadfleengfvvkdfiqwvknnpmprnihr
ryvqdtefalwavkkkakwvfnkpknekylrplilkspvvsglektkhptqkslalmeki
isihtnpndivldpfmgsgttglacknlernfigiesekeyfqtakkrlnlflehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5hekB (B:)
miqiyhadafeiikdfyqqnlkvdaiitdppnfkllewiaryaplvnpngcmvifcsyrf
isyiadfleengfvvkdfiqwvknnpmpnihrryvqdtefalwavkkkakwvfnkpknek
ylrpllslalmekiisihtnpndivldpfmgsgttglacknlernfigiesekeyfqtak
krlnl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5hekC (C:)
miqiyhadafeiikdfyqqnlkvdaiitdppynisvknnfptlksakrqgidfgewdknf
kllewiaryaplvnpngcmvifcsyrfisyiadfleengfvvkdfiqwvknnpmprnihr
ryvqdtefalwavkkkakwvfnkpknekylrplilkspvvsglektkhptqkslalmeki
isihtnpndivldpfmgsgttglacknlernfigiesekeyfqtakkrlnlflehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5hekC (C:)
miqiyhadafeiikdfyqqnlkvdaiitdppllewiaryaplvnpngcmvifcsyrfisy
iadfleengfvvkdfiqwvknnpprnihrryvqdtefalwavkkkakwvfnkpknekylr
plilkkslalmekiisihtnpndivldpfmgsgttglacknlernfigiesekeyfqtak
krlnl

  • Chain 'D':
    No sequence available.