PDB entry 5h5k
View 5h5k on RCSB PDB site
Description: ATP and CMP bound Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
Class: transferase
Keywords: Kinase, Tranferase, Complex, Nucleotide Binding, TRANSFERASE
Deposited on
2016-11-06, released
2017-06-28
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-08-30, with a file datestamp of
2017-08-25.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.25
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: thymidylate kinase
Species: Aquifex aeolicus (strain VF5) [TaxId:224324]
Gene: tmk, aq_969
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5h5ka_ - Chain 'B':
Compound: thymidylate kinase
Species: Aquifex aeolicus (strain VF5) [TaxId:224324]
Gene: tmk, aq_969
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5h5kb_ - Heterogens: MG, ATP, EDO, C5P, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5h5kA (A:)
mliafegidgsgkttqakklyeylkqkgyfvslyrepggtkvgevlreillteelderte
lllfeasrsklieekiipdlkrdkvvildrfvlstiayqgygkgldvefiknlnefatrg
vkpditllldipvdialrrlkeknrfenkeflekvrkgflelakeeenvvvidasgeeee
vfkeilralsgvlrv
Sequence, based on observed residues (ATOM records): (download)
>5h5kA (A:)
mliafegidgsgkttqakklyeylkqkgyfvslyrepggtkvgevlreillteelderte
lllfeasrsklieekiipdlkrdkvvildrfvlstiayqgygkgldvefiknlnefatrg
vkpditllldipvdialrrlkeknrfenkeflekvrkgflelakeeenvvvidasgeeee
vfkeilralsgvl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5h5kB (B:)
mliafegidgsgkttqakklyeylkqkgyfvslyrepggtkvgevlreillteelderte
lllfeasrsklieekiipdlkrdkvvildrfvlstiayqgygkgldvefiknlnefatrg
vkpditllldipvdialrrlkeknrfenkeflekvrkgflelakeeenvvvidasgeeee
vfkeilralsgvlrv
Sequence, based on observed residues (ATOM records): (download)
>5h5kB (B:)
mliafegidgsgkttqakklyeylkqkgyfvslyrepggtkvgevlreillteelderte
lllfeasrsklieekiipdlkrdkvvildrfvlstiayqgygkgldvefiknlnefatrg
vkpditllldipvdialrrlkeknrfenkeflekvrkgflelakeeenvvvidasgeeee
vfkeilralsgvl