PDB entry 5gvm
View 5gvm on RCSB PDB site
Description: Plasmodium vivax SHMT bound with PLP-glycine and GS557
Class: transferase/transferase inhibitor
Keywords: alpha and beta protein, methyltransferase activity, TRANSFERASE-TRANSFERASE INHIBITOR complex
Deposited on
2016-09-06, released
2017-07-12
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-07-12, with a file datestamp of
2017-07-07.
Experiment type: XRAY
Resolution: 2.24 Å
R-factor: N/A
AEROSPACI score: 0.25
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Serine hydroxymethyltransferase, putative
Species: Plasmodium vivax (strain Salvador I) [TaxId:126793]
Gene: PVX_100730
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5gvma_ - Chain 'B':
Compound: Serine hydroxymethyltransferase, putative
Species: Plasmodium vivax (strain Salvador I) [TaxId:126793]
Gene: PVX_100730
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5gvmb_ - Chain 'C':
Compound: Serine hydroxymethyltransferase, putative
Species: Plasmodium vivax (strain Salvador I) [TaxId:126793]
Gene: PVX_100730
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5gvmc_ - Heterogens: PLG, G57, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>5gvmA (A:)
mfnnepleqidkelhdiladeekrqretinliasenltngavreclgnrvsnkysegypk
kryyggndfidkieelcqkraleafnvsdeewgvnvqplsgsaanvqalyalvgvkgkim
gmhlcsgghlthgffdekkkvsitsdmfesklykcnsqgyvdldavremalsfkpkviic
gytsyprdidyqqfrqicdevnaylfadishissfvacnilnnpflhadvvtttthkilr
gprsaliffnkkrnpgieqkinsavfpsfqggphnnkiaavacqlkevhspafkeytqqv
llnskalakaliskqidlvtngtdnhlivvdlrkfsitgsklqetcnainvslnkntips
dvdcvspsgvrigtpamttrgakekdmefiadvlaraikitvdlqeqygkklvdfkkglp
gnaqlqqlkqevvtwagalpfp
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>5gvmB (B:)
mfnnepleqidkelhdiladeekrqretinliasenltngavreclgnrvsnkysegypk
kryyggndfidkieelcqkraleafnvsdeewgvnvqplsgsaanvqalyalvgvkgkim
gmhlcsgghlthgffdekkkvsitsdmfesklykcnsqgyvdldavremalsfkpkviic
gytsyprdidyqqfrqicdevnaylfadishissfvacnilnnpflhadvvtttthkilr
gprsaliffnkkrnpgieqkinsavfpsfqggphnnkiaavacqlkevhspafkeytqqv
llnskalakaliskqidlvtngtdnhlivvdlrkfsitgsklqetcnainvslnkntips
dvdcvspsgvrigtpamttrgakekdmefiadvlaraikitvdlqeqygkklvdfkkglp
gnaqlqqlkqevvtwagalpfp
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>5gvmC (C:)
mfnnepleqidkelhdiladeekrqretinliasenltngavreclgnrvsnkysegypk
kryyggndfidkieelcqkraleafnvsdeewgvnvqplsgsaanvqalyalvgvkgkim
gmhlcsgghlthgffdekkkvsitsdmfesklykcnsqgyvdldavremalsfkpkviic
gytsyprdidyqqfrqicdevnaylfadishissfvacnilnnpflhadvvtttthkilr
gprsaliffnkkrnpgieqkinsavfpsfqggphnnkiaavacqlkevhspafkeytqqv
llnskalakaliskqidlvtngtdnhlivvdlrkfsitgsklqetcnainvslnkntips
dvdcvspsgvrigtpamttrgakekdmefiadvlaraikitvdlqeqygkklvdfkkglp
gnaqlqqlkqevvtwagalpfp