PDB entry 5gqo
View 5gqo on RCSB PDB site
Description: Structure of the second Single Stranded DNA Binding protein (SSBb) from Mycobacterium smegmatis
Class: DNA binding protein
Keywords: OB fold, inter-subunit clamp, Paralogous SSB, variability, quaternary structure, DNA BINDING PROTEIN
Deposited on
2016-08-08, released
2016-10-12
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-12-06, with a file datestamp of
2017-12-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Single-stranded DNA-binding protein
Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
Gene: MSMEG_4701
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5gqoa_ - Chain 'B':
Compound: Single-stranded DNA-binding protein
Species: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
Gene: MSMEG_4701
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5gqob_ - Heterogens: CA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5gqoA (A:)
mgsshhhhhhssglvprgshmnmfetpftvvgniitnpvrlrfgdqelykfrvasnsrrr
spegtwepgnslyvtvncwgnlargvsaslgkgdsvvvvghlytneyedregvrrssvev
ratavgpdlsrciarvekvqpsqgpradaggdpervpdddvdrrdaddepddladddvad
lagdglplta
Sequence, based on observed residues (ATOM records): (download)
>5gqoA (A:)
etpftvvgniitnpvrlrfgdqelykfrvasnslyvtvncwgnlargvsaslgkgdsvvv
vghlytneyerssvevratavgpdlsrciarvekvqp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5gqoB (B:)
mgsshhhhhhssglvprgshmnmfetpftvvgniitnpvrlrfgdqelykfrvasnsrrr
spegtwepgnslyvtvncwgnlargvsaslgkgdsvvvvghlytneyedregvrrssvev
ratavgpdlsrciarvekvqpsqgpradaggdpervpdddvdrrdaddepddladddvad
lagdglplta
Sequence, based on observed residues (ATOM records): (download)
>5gqoB (B:)
fetpftvvgniitnpvrlrfgdqelykfrvasnsrrrnslyvtvncwgnlargvsaslgk
gdsvvvvghlytneyssvevratavgpdlsrciarvek