PDB entry 5gpa
View 5gpa on RCSB PDB site
Description: Structural analysis of fatty acid degradation regulator FadR from Bacillus halodurans
Class: transcription, DNA binding protein
Keywords: fadR, transcriptional regulator, TRANSCRIPTION, DNA BINDING PROTEIN
Deposited on
2016-08-01, released
2017-03-01
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-12-06, with a file datestamp of
2017-12-01.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: N/A
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Transcriptional regulator (TetR/AcrR family)
Species: Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) [TaxId:272558]
Gene: BH3102
Database cross-references and differences (RAF-indexed):
- Uniprot Q9K8A4 (Start-194)
- engineered mutation (116)
Domains in SCOPe 2.07: d5gpaa1, d5gpaa2 - Chain 'B':
Compound: Transcriptional regulator (TetR/AcrR family)
Species: Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) [TaxId:272558]
Gene: BH3102
Database cross-references and differences (RAF-indexed):
- Uniprot Q9K8A4
- engineered mutation (116)
Domains in SCOPe 2.07: d5gpab1, d5gpab2 - Heterogens: MG, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5gpaA (A:)
mgkkkgpkydqiidaavqviaehgyhqaqvskiakaagvadgtiylyfnnkedvlislfq
ekmgrfvdkirsqmneatdveeklkilvnmhfkqlaadhklaivtqlelrqsntelalki
nevlkgylnlldellmegkekgyffqeldtrlarqmifgtldevvtnwvmkdckydltal
vkpvhqlllgglrhr
Sequence, based on observed residues (ATOM records): (download)
>5gpaA (A:)
kkkgpkydqiidaavqviaehgyhqaqvskiakaagvadgtiylyfnnkedvlislfqek
mgrfvdkirsqmneatdveeklkilvnmhfkqlaadhklaivtqleltelalkinevlkg
ylnlldellmegkekgyffqeldtrlarqmifgtldevvtnwvmkdckydltalvkpvhq
lllgglrhr
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5gpaB (B:)
mgkkkgpkydqiidaavqviaehgyhqaqvskiakaagvadgtiylyfnnkedvlislfq
ekmgrfvdkirsqmneatdveeklkilvnmhfkqlaadhklaivtqlelrqsntelalki
nevlkgylnlldellmegkekgyffqeldtrlarqmifgtldevvtnwvmkdckydltal
vkpvhqlllgglrhr
Sequence, based on observed residues (ATOM records): (download)
>5gpaB (B:)
kydqiidaavqviaehgyhqaqvskiakaagvadgtiylyfnnkedvlislfqekmgrfv
dkirsqmneatdveeklkilvnmhfkqlaadhklaivtqlelrqsntelalkinevlkgy
lnlldellmegkekgyffqeldtrlarqmifgtldevvtnwvmkdckydltalvkpvhql
llgglr