PDB entry 5gp4

View 5gp4 on RCSB PDB site
Description: Lactobacillus brevis CGMCC 1306 Glutamate decarboxylase
Class: lyase
Keywords: Glutamate decarboxylase Lactobacillus brevis CGMCC 1306 Gamma-aminobutyric acid pyridoxal phosphate (PLP), LYASE
Deposited on 2016-07-31, released 2017-08-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-09-12, with a file datestamp of 2018-09-07.
Experiment type: XRAY
Resolution: 2.16 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate decarboxylase
    Species: LACTOBACILLUS BREVIS [TaxId:1580]
    Gene: GAD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5gp4a_
  • Chain 'B':
    Compound: Glutamate decarboxylase
    Species: LACTOBACILLUS BREVIS [TaxId:1580]
    Gene: GAD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5gp4b_
  • Chain 'C':
    Compound: Glutamate decarboxylase
    Species: LACTOBACILLUS BREVIS [TaxId:1580]
    Gene: GAD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5gp4c_
  • Heterogens: PLP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5gp4A (A:)
mamlygkhthetdetlkpifgasaerhdlpkyklakhalepreadrlvrdqlldegnsrl
nlatfcqtymepeavelmkdtleknaidkseyprtaeienrcvniianlwhapeaesftg
tstigsseacmlaglamkfawrkrakangldltahqpnivisagyqvcwekfcvywdidm
hvvpmdddhmslnvdhvldyvddytigivgimgitytgqyddlarldavverynrttkfp
vyihvdaasggfytpfiepelkwdfrlnnvisinasghkyglvypgvgwviwrdqqylpk
elvfkvsylggelptmainfshsasqligqyynfirfgfdgyreiqekthdvarylaksl
tklggfslindghelplicyeltadsdrewtlydlsdrllmkgwqvptyplpknmtdrvi
qrivvradfgmsmahdfiddltqaihdldqahivfhsdpqpkkygfth

    Sequence, based on observed residues (ATOM records): (download) 
    >5gp4A (A:)
etlkpifgasaerhdlpkyklakhalepreadrlvrdqlldegnsrlnlatfcqtymepe
avelmkdtleknaidkseyprtaeienrcvniianlwhapeaesftgtstigsseacmla
glamkfawrkrakangldltahqpnivisagyqvcwekfcvywdidmhvvpmdddhmsln
vdhvldyvddytigivgimgitytgqyddlarldavverynrttkfpvyihvdaasggfy
tpfiepelkwdfrlnnvisinasghkyglvypgvgwviwrdqqylpkelvfkvsylggel
ptmainfshsasqligqyynfirfgfdgyreiqekthdvarylaksltklggfslindgh
elplicyeltadsdrewtlydlsdrllmkgwqvptyplpknmtdrviqrivvradfgmsm
ahdfiddltqaihdldqahiv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5gp4B (B:)
mamlygkhthetdetlkpifgasaerhdlpkyklakhalepreadrlvrdqlldegnsrl
nlatfcqtymepeavelmkdtleknaidkseyprtaeienrcvniianlwhapeaesftg
tstigsseacmlaglamkfawrkrakangldltahqpnivisagyqvcwekfcvywdidm
hvvpmdddhmslnvdhvldyvddytigivgimgitytgqyddlarldavverynrttkfp
vyihvdaasggfytpfiepelkwdfrlnnvisinasghkyglvypgvgwviwrdqqylpk
elvfkvsylggelptmainfshsasqligqyynfirfgfdgyreiqekthdvarylaksl
tklggfslindghelplicyeltadsdrewtlydlsdrllmkgwqvptyplpknmtdrvi
qrivvradfgmsmahdfiddltqaihdldqahivfhsdpqpkkygfth

    Sequence, based on observed residues (ATOM records): (download) 
    >5gp4B (B:)
dlpkyklakhalepreadrlvrdqlldegnsrlnlatfcqtymepeavelmkdtleknai
dkseyprtaeienrcvniianlwhapeaesftgtstigsseacmlaglamkfawrkraka
ngldltahqpnivisagyqvcwekfcvywdidmhvvpmdddhmslnvdhvldyvddytig
ivgimgitytgqyddlarldavverynrttkfpvyihvdaasggfytpfiepelkwdfrl
nnvisinasghkyglvypgvgwviwrdqqylpkelvfkvsylggelptmainfshsasql
igqyynfirfgfdgyreiqekthdvarylaksltklggfslindghelplicyeltadsd
rewtlydlsdrllmkgwqvptyplpknmtdrviqrivvradfgmsmahdfiddltqaihd
ldqa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5gp4C (C:)
mamlygkhthetdetlkpifgasaerhdlpkyklakhalepreadrlvrdqlldegnsrl
nlatfcqtymepeavelmkdtleknaidkseyprtaeienrcvniianlwhapeaesftg
tstigsseacmlaglamkfawrkrakangldltahqpnivisagyqvcwekfcvywdidm
hvvpmdddhmslnvdhvldyvddytigivgimgitytgqyddlarldavverynrttkfp
vyihvdaasggfytpfiepelkwdfrlnnvisinasghkyglvypgvgwviwrdqqylpk
elvfkvsylggelptmainfshsasqligqyynfirfgfdgyreiqekthdvarylaksl
tklggfslindghelplicyeltadsdrewtlydlsdrllmkgwqvptyplpknmtdrvi
qrivvradfgmsmahdfiddltqaihdldqahivfhsdpqpkkygfth

    Sequence, based on observed residues (ATOM records): (download) 
    >5gp4C (C:)
etlkpifgasaerhdlpkyklakhalepreadrlvrdqlldegnsrlnlatfcqtymepe
avelmkdtleknaidkseyprtaeienrcvniianlwhapeaesftgtstigsseacmla
glamkfawrkrakangldltahqpnivisagyqvcwekfcvywdidmhvvpmdddhmsln
vdhvldyvddytigivgimgitytgqyddlarldavverynrttkfpvyihvdaasggfy
tpfiepelkwdfrlnnvisinasghkyglvypgvgwviwrdqqylpkelvfkvsylggel
ptmainfshsasqligqyynfirfgfdgyreiqekthdvarylaksltklggfslindgh
elplicyeltadsdrewtlydlsdrllmkgwqvptyplpknmtdrviqrivvradfgmsm
ahdfiddltqaihdldqah