SCOPe 2.08: Structural Classification of Proteins

PDB entry 5g0r

View 5g0r on RCSB PDB site
Description: methyl-coenzyme m reductase I from methanothermobacter marburgensis exposed to 3-nitrooxypropanol
Class: transferase
Keywords: transferase, methyl-coenzymem, methyl-coenzymem reductase exposed to 3-nitrooxypropanol, posttranslational modification, binding sites, catalysis, coenzymes, disulfides, hydrogen, ligands, mesna, metalloporphyrins, methane, methanobacterium, nickel, oxidation-reduction, oxdoreductases, phosphothreonine, thioglycine, 3- nitrooxypropanol, inhibitor, greenhouse gas
Deposited on 2016-03-22, released 2016-04-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-05-15, with a file datestamp of 2019-05-10.
Experiment type: XRAY
Resolution: 1.25 Å
R-factor: N/A
AEROSPACI score: 0.62 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Methyl-coenzyme M reductase I subunit alpha
Species: METHANOTHERMOBACTER MARBURGENSIS [TaxId:145263]
Database cross-references and differences (RAF-indexed):
- Uniprot P11558 (Start-549)
Domains in SCOPe 2.08: d5g0ra1, d5g0ra2
Chain 'B':
Compound: Methyl-coenzyme M reductase I subunit beta
Species: METHANOTHERMOBACTER MARBURGENSIS [TaxId:145263]
Database cross-references and differences (RAF-indexed):
- Uniprot P11560 (Start-442)
Domains in SCOPe 2.08: d5g0rb1, d5g0rb2
Chain 'C':
Compound: Methyl-coenzyme M reductase I subunit gamma
Species: METHANOTHERMOBACTER MARBURGENSIS [TaxId:145263]
Database cross-references and differences (RAF-indexed):
- Uniprot P11562 (Start-248)
Domains in SCOPe 2.08: d5g0rc_
Chain 'D':
Compound: Methyl-coenzyme M reductase I subunit alpha
Species: METHANOTHERMOBACTER MARBURGENSIS [TaxId:145263]
Database cross-references and differences (RAF-indexed):
- Uniprot P11558
Domains in SCOPe 2.08: d5g0rd1, d5g0rd2
Chain 'E':
Compound: Methyl-coenzyme M reductase I subunit beta
Species: METHANOTHERMOBACTER MARBURGENSIS [TaxId:145263]
Database cross-references and differences (RAF-indexed):
- Uniprot P11560 (Start-442)
Domains in SCOPe 2.08: d5g0re1, d5g0re2
Chain 'F':
Compound: Methyl-coenzyme M reductase I subunit gamma
Species: METHANOTHERMOBACTER MARBURGENSIS [TaxId:145263]
Database cross-references and differences (RAF-indexed):
- Uniprot P11562 (Start-248)
Domains in SCOPe 2.08: d5g0rf_
Heterogens: MG, F43, TP7, NA, K, CL, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>5g0rA (A:)
madklfinalkkkfeespeekkttfytlggwkqserktefvnagkevaakrgipqynpdi
gtplgqrvlmpyqvsttdtyvegddlhfvnnaamqqmwddirrtvivglnhahaviekrl
gkevtpetithyletvnhampgaavvqehmvethpalvadsyvkvftgndeiadeidpaf
vidinkqfpedqaetlkaevgdgiwqvvriptivsrtcdgattsrwsamqigmsmisayk
qaageaatgdfayaakhaevihmgtylpvrrargenepggvpfgyladicqssrvnyedp
vrvsldvvatgamlydqiwlgsymsggvgftqyataaytdnilddftyfgkeyvedkygl
ceapnnmdtvldvatevtfygleqyeeypalledqfggsqraavvaaaagcstafatgna
qtglsgwylsmylhkeqhsrlgfygydlqxqcgasnvfsirgdeglplelrgpnypnyam
nvghqgeyagisqaphaargdafvfnplvkiafaddnlvfdftnvrgefakgalrefepa
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