PDB entry 5g0h

View 5g0h on RCSB PDB site
Description: Crystal structure of Danio rerio HDAC6 CD2 in complex with (S)- trichostatin A
Class: cell cycle
Keywords: cell cycle, histone, histone deacetylase
Deposited on 2016-03-18, released 2016-07-27
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-09-28, with a file datestamp of 2016-09-23.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hdac6
    Species: Danio rerio [TaxId:7955]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5g0ha_
  • Heterogens: E1Z, K, ZN, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5g0hA (A:)
    gpkaeeemsnelqnldvqgkskatgtglvyvdaftrfhclwdashpecparvstvmemle
    tegllgrcvqvearavtedelllvhtkeyvelmkstqnmteeelktlaekydsvylhpgf
    fssaclsvgsvlqlvdkvmtsqlrngfsinrppghhaqadkmngfcmfnnlaiaaryaqk
    rhrvqrvlivdwdvhhgqgiqyifeedpsvlyfsvhryedgsfwphlkesdsssvgsgag
    qgyninlpwnkvgmesgdyitafqqlllpvayefqpqlvlvaagfdavigdpkggmqvsp
    ecfsilthmlkgvaqgrlvlaleggynlqstaegvcasmrsllgdpcphlpssgapcesa
    lksisktisdlypfwkslqtfeggplsevsplpapvcaevkvsspitglvydqrmmlhhn
    mwdshhpelpqrisrifsrheelrllsrchriparlateeelalchsskhisiikssehm
    kprdlnrlgdeynsifisnesytcallaagscfnsaqailtgqvrnavaivrppghhaek
    dtacgfcffntaaltaryaqsitreslrvlivdwdvhhgngtqhifeeddsvlyislhry
    edgaffpnsedanydkvglgkgrgynvnipwnggkmgdpeymaafhhlvmpiarefapel
    vlvsagfdaargdplggfqvtpegyahlthqlmslaagrvliileggynltsisesmsmc
    tsmllgdsppsldhltplktsatvsinnvlrahapfwsslrvnipeslrlslpspkpkgk
    ctpggkgkksprqs
    

    Sequence, based on observed residues (ATOM records): (download)
    >5g0hA (A:)
    spitglvydqrmmlhhnmwdshhpelpqrisrifsrheelrllsrchriparlateeela
    lchsskhisiikssehmkprdlnrlgdeynsifisnesytcallaagscfnsaqailtgq
    vrnavaivrppghhaekdtacgfcffntaaltaryaqsitreslrvlivdwdvhhgngtq
    hifeeddsvlyislhryedgaffpnsedanydkvglgkgrgynvnipwnggkmgdpeyma
    afhhlvmpiarefapelvlvsagfdaargdplggfqvtpegyahlthqlmslaagrvlii
    leggynltsisesmsmctsmllgdsppsldhltplktsatvsinnvlrahapfwsslrvn